Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00156 ATGGCAATGATTATGCTTCATGGGACTCTCCATGCTACAATTTACGAAGTCGATACGATCAGTGGTGCCTCGGGTGGAAATCTTTTTACCATGATCAGGCAAAATATTGAGGAGACTGTTGGTATTGGAAAGGGAGCTCCAAAAATCTATGCAACCGTTGATTTAGAGAAAGCAAGAGTGGGAAGGACTAGGAAAATACTGAATGACATAATCAGAGCATATGTGCCTGTGGAGGAGGTCTTGCAGGGTGAGGAGATTGATAAATGGGTTGAAATATTGGATGTGCACAAAAAACCAGTACAAGGTGATTCAAAGATCCATGTGAGGCTGCAATACTTTGATATCAAGAAAGATCGATGCTGGGGTCGAGGCATTAGGAGTCCTAAGTTTCCTGGAGTTCCCTATACCTTCTTTGCACAAAGACAAGGATGCAGGGTATCTCTGTACCAAGATGCTCATGTGCCTGAAAACTTTATCCCCAAGATTCCACTTGCTGGAGGCAAGACTTATGAGCCTCACAGGTGCTGGGAGGATATTTTTGATGCAATCACAAATGCAAAACACTTGATATACATTACTGGTTGGTCTGTTTATACCGAGATTTCCTTGGTAAGGGATTCTAGGAGGCCAAAGGCCGGTGGAGATTCGACACTCGGCGAGCTTCTTAAGAAGAAGGCAAGTGAAGGTGTTAAGGTGTTGATGCTTGTTTGGGACGATAGAACATCGGTTGGTTTGTTGAAAAAAGATGGATTGATGGCTAGTCATGATGAAGAAACAGCACAGTTCTTCTCTAACACTCAAGTAAACTGTTGTTTATGCCCCCGAAATCCTGATGATGGAGGTAGCATTGTTCAGAGTTTCCAAATTTCTACCATGTTTACTCATCACCAGAAGATTGTTGTTGTGGACAGTGAGATGCCAGGTAAAGGAACACATATGCGAAGGGTTGTGAGTTTTGTTGGGGGTATTGATCTTTGTGATGGAAGATATGATACAGCATTCCACTCACTCTTCAGAACCTTAGACACAGCACACCATGATGATTTTCATCAACCTAACTTTCCTGGTGCGGATATCTCAAAAGGCGGTCCTAGGGAGCCTTGGCATGATATCCACTGCCGGCTCGAAGGGCCGGTAGCTTGGGATGTTTTGTTTAACTTTGAGCAGAGATGGAGGAGGCAAGGTGGAAAGGATGTACTTCTCCATATGAGAGAGCTCGAAAATTCCATTGTTCCCCCCTCCCCTGTGATGTTTCCTGAAGATCATGAGACATGGAATGTTCAGTTATTCAGATCAATTGATGGTGGTGCTGCTTTCGGTTTCCCTGATAGTCCTGAAGAGGCTGCCAAAGTAGGCCTTGTTAGTGGCAAGGATAACATCATAGACCGTAGTATTCAAGATGCTTATATCCATGCCATTCGTCGTGCCAAGAATTTCATCTATATTGAAAATCAGTACTTCCTTGGAAGCTCTTATAACTGGAAGCCTGAGGATATTAAGCCTGAAGATATTGGTGCTTTACATCTAATTCCAAGGGAGCTTTCCCTTAAGATTGTTAGTAAGATTGAAGCCGGGGAACGATTTGCTGTGTATGTTGTGGTCCCAATGTGGCCGGAAGGTGTGCCGGAGAGTTCATCAGTTCAGGCTATATTGGACTGGCAAAGAAGGACAATGGAGATGATGTACAAGGACATTACTGAGGCTCTCCAAGCCAAGGGTATTGAGGACGATCCTCGGAACTATTTGACATTCTTCTGCCTTGGTAATCGCGAGGTGAAGAAGGATGGAGAGTATCAGCCTTCTCAAAAACCAGAGCCTGGTTCGGATTATGAGAACGCCCAAAATGCGCGCCGCTTCATGATTTATGTTCATACCAAGATGATGATTGTTGATGATGAATACATAATTATCGGATCAGCCAACATCAACCAAAGATCAATGGACGGTGCGAGGGACTCCGAAATTGCCATGGGAGGTTACCAGCCTTACCACTTGGCAACCAGGCAGCCGGCGCGTGGCCAGATCCATGGTTTCCGAATGGCATTGTGGTATGAACACCTTGGCATGCTTCATGACTCATTCCTGAGGCCAGAAAGCAAAGAATGTATCAGCAGGGTGAACAAAGTTGCTGATCAGTATTGGGATCTCTTCTCTAAGGAGTCACTTGAGCATGACCTTCCCGGCCACCTGCTCCGATACCCGATCAGCGTTGCCAGTGAGGGACACATCACAACTCTTCCTGGATTCAAATGCTTCCCGGACACGAAAGCGCGAATTCTTGGCGCCAAAGCAGATTACCTGCCCCCTATCCTTACTACTTAG 2322 0.4531 MAMIMLHGTLHATIYEVDTISGASGGNLFTMIRQNIEETVGIGKGAPKIYATVDLEKARVGRTRKILNDXIIRAYVPVEEVLQGEEIDKWVEILDVHKKPVQGDSKIHVRLQYFDIKKDRCWGRGIRSPKFPGVPYTFFAQRQGCRVSLYQDAHVPENFIPKIPLAGGKTYEPHRCWEDIFDAITNAKHLIYITGWSVYTEISLVRDSRRPKAGGDSTLGELLKKKASEGVKVLMLVWDDRTSVGLLKKDGLMASHDEETAQFFSNTQVNCCLCPRNPDDGGSIVQSFQISTMFTHHQKIVVVDSEMPGKGTHMRRVVSFVGGIDLCDGRYDTAFHSLFRTLDTAHHDDFHQPNFPGADISKGGPREPWHDIHCRLEGPVAWDVLFNFEQRWRRQGGKDVLLHMRELENSIVPPSPVMFPEDHETWNVQLFRSIDGGAAFGFPDSPEEAAKVGLVSGKDNIIDRSIQDAYIHAIRRAKNFIYIENQYFLGSSYNWKPEDIKPEDIGALHLIPRELSLKIVSKIEAGERFAVYVVVPMWPEGVPESSSVQAILDWQRRTMEMMYKDITEALQAKGIEDDPRNYLTFFCLGNREVKKDGEYQPSQKPEPGSDYENAQNARRFMIYVHTKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGGYQPYHLATRQPARGQIHGFRMALWYEHLGMLHDSFLRPESKECISRVNKVADQYWDLFSKESLEHDLPGHLLRYPISVASEGHITTLPGFKCFPDTKARILGAKADYLPPILTT 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00156 774 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 292 330 IPR001736 GO:0003824
Arst2g00156 774 SUPERFAMILY Phospholipase D/nuclease 118 406 - -
Arst2g00156 774 Pfam Phospholipase D Active site motif 621 647 IPR001736 GO:0003824
Arst2g00156 774 Pfam Phospholipase D Active site motif 292 330 IPR001736 GO:0003824
Arst2g00156 774 FunFam Phospholipase D 433 666 - -
Arst2g00156 774 PIRSF PLD_plant 1 71 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Arst2g00156 774 PIRSF PLD_plant 65 774 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Arst2g00156 774 PIRSF PLD_plant 1 71 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Arst2g00156 774 PIRSF PLD_plant 65 774 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Arst2g00156 774 SMART pld_4 292 330 IPR001736 GO:0003824
Arst2g00156 774 SMART pld_4 620 647 IPR001736 GO:0003824
Arst2g00156 774 PANTHER PHOSPHOLIPASE D 66 762 IPR015679 -
Arst2g00156 774 Gene3D Endonuclease Chain A 441 663 - -
Arst2g00156 774 FunFam Phospholipase D delta 167 410 - -
Arst2g00156 774 Gene3D Endonuclease Chain A 166 411 - -
Arst2g00156 774 CDD PLDc_pPLDalpha_2 458 667 - -
Arst2g00156 774 SUPERFAMILY Phospholipase D/nuclease 416 704 - -
Arst2g00156 774 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 620 647 IPR001736 GO:0003824
Arst2g00156 774 Pfam Phospholipase D C terminal 693 764 IPR024632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00156 Arst-Chr2 1363630 1367637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00156 1 774 Phospholipase D Gene Family (Wang group) AT1G52570 75.679 0.0 1294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00156 K01115 - gmx:100786410 1363.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst2g00156 2 1363630 1367637 Arst7g03235 7 78208291 78212128 ECH
Arst8g03484 8 45611393 45618241 Arst2g00156 2 1363630 1367637 ECH
Arst2g00156 2 1363630 1367637 Arst2g00156 2 1363630 1367637 ECH
Arst7g03235 7 78208291 78212128 Arst2g00156 2 1363630 1367637 PCT