Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Arst2g00089 | ATGGGAGGTTGCTGTTGTTCTGCCAGAAAACCTCATCTTCACGGAACGCCGGTTTATTACTATTGTCCGCCAGCTTTGGAAGAGCGCGAGTCTCTAACCTCTAACGACGGTAATGGGACAGCTGCTTCACTCACCACCGGACTGCTCATCGGCTTGAACTTGGAATCAACCATACCAGATACTTACCAGTCGCCTCCTGCGCCTCTACCGTATGATACTGTCCTGAGAGGTCCTGCATCAACAGATTCTGAGTCAGGTAGAGAAACCATTAGTGGTAGTAGTTTCGAAACTTTAGTTACGTGTGAAGATCTTGAAGAATCAGATTGTAAAGCTCAACCTAAATCGGCACCCTTATCTCCAAGGAAGCTGGAACCTTTAAAATCAAATGAATCTCATGCATTGGTGACAGAAGAAGAGGATGTATGTCCAATTTGTCTAGAAGAATATGATGCTGAGAATCCCAAAACACTGACGAAATGCGACCACCACTTTCACCTGTCATGCATTCTCGAGTGGATGGAAAGAAGCGACTCGTGTCCCATATGTGATCAGGAGATGATCTTTGACCAGCCACTGGATTAG | 582 | 0.4588 | MGGCCCSARKPHLHGTPVYYYCPPALEERESLTSNDGNGTAASLTTGLLIGLNLESTIPDTYQSPPAPLPYDTVLRGPASTDSESGRETISGSSFETLVTCEDLEESDCKAQPKSAPLSPRKLEPLKSNESHALVTEEEDVCPICLEEYDAENPKTLTKCDHHFHLSCILEWMERSDSCPICDQEMIFDQPLD | 193 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Arst2g00089 | 193 | MobiDBLite | consensus disorder prediction | 108 | 132 | - | - | |
Arst2g00089 | 193 | PANTHER | ZINC FINGER, RING/FYVE/PHD-TYPE | 41 | 190 | - | - | |
Arst2g00089 | 193 | ProSiteProfiles | Zinc finger RING-type profile. | 142 | 183 | IPR001841 | - | |
Arst2g00089 | 193 | MobiDBLite | consensus disorder prediction | 71 | 90 | - | - | |
Arst2g00089 | 193 | CDD | RING-H2_AIRP1-like | 138 | 186 | - | - | |
Arst2g00089 | 193 | SMART | ring_2 | 142 | 182 | IPR001841 | - | |
Arst2g00089 | 193 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 120 | 189 | IPR013083 | - | |
Arst2g00089 | 193 | FunFam | Putative E3 ubiquitin-protein ligase RHB1A | 118 | 187 | - | - | |
Arst2g00089 | 193 | Pfam | Ring finger domain | 141 | 182 | IPR001841 | - | |
Arst2g00089 | 193 | SUPERFAMILY | RING/U-box | 133 | 189 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Arst2g00089 | Arst-Chr2 | 664735 | 667613 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Arst2g00089 | 1 | 193 | C3H Transcription Factor Family | AT4G00335 | 59.067 | 1.27e-76 | 226 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Arst2g00089 | - | - | gmx:100804435 | 341.658 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Arst4g03270 | 4 | 110099027 | 110103001 | Arst2g00089 | 2 | 664735 | 667613 | PCT |