Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00082 ATGCAGTCAGGTGGCGGTGGCCGGAACCCTGGGGTTGGCCGGACGGGCTCCACGGCGACGTCGTCAGCTGCGGCGTCGCCGTCGTCTTCGTCTTCGGCATCCCAATTGGGGCTTGATCAGCATCATCTTCAGCAGCAGCAGCAACAACAACAGCAGCAGCAGATAAGTTCTAGTAGACAGTCATTTCAACAACAGTTACTTAGAAAACCTGAAGGGAATGAAGCTTTCTTAGCATATCAAGCTGGGCTCCAGGGTGCCTTTGGGAATAACAATTTCTCATCTCCTGGTGCCATGCAATTGCCCCAGCAGTCTCGAAAGTTCATGGAATTAGCTCAACATGGAGCCAGCCAAGATGGCCAGTTCAGGGCTCAAGGTGTTGAGCAGCAAATGATGAATCCTATGCATCAAGCATGCCTTCAATATGCACTTGCGCAACAAAAATCTGCGATGGGAATTCAGTCGCAGCAGCAAGCTAAAATGGGAATGTTAAACCCATCTCTGAAGGATCAGGAAATGCGCGTGGCAAATCTGAAAATGCAGGAAATGATGGCTATGCAGGCTATGCATCAAGCTCAAGGATCATCATCTAGGAATTCTTCCGAACATGTGTCACGTGGGGAAAAACAGATCGAGCCAGGACAGCAGACAGCTCCTGATCAGAAGACCGAAGGAAAGCCTTTATCCCAAGGACCAGCTATTGGACATGTAATGCCTGGCAATGTGGTGAGACCAATGCATGTGCCAGAATCTCAGCAGGGAATTCAAAATTTTATGGCAATGTCTGCGCAATACCAGGCTATGCAGGCATGGGCACGCGAACGCAACATAGATTTGTCGCATCCTGCAAATGCTAACATAATGTCGCAGCTCATTCCAATGATGCAGGCAAGGATGGCCTCCCAACAAAAGGTCAACGAGAGCAACGTTGGTGTTCAGTCAACACCTGTTCCTGTTTCAAGGCAGCAGGTCACTTCTCCAGCTGTTGGAAGTGAGGGTTCTGCACATGCTAATTCGTCAAGTGAAGCATCTGGGCAGTCAGGTTCTTCAAAAGCCAGGCAGTCAGTTCCACCCGGCCATTTTGGCCCCACAACAAATTCTGGCATAGGCAGTGGCTCCAGTGACATGGTGATGCAGCAACTTGGTCCTCAAGGAAGAGAGTCTCCAGCCTCTTTGAGGCAACCAGTCTCAGTGGGAAATGGAATGCCCTCTGTGCATCCTCATCAGTCTTCTGCCAACAGGAACTCAGGTGCAGAACATCCCATGGGTGCAAAAACTTCATCATCTGGTTCAGAACCCCCGCAAATGCAAAACTTAAGGCAGGTAAACCAATCCTCATCTCAGGCTGGAGTTCCAACAAATGAAGGTGGCTCGGGAAGTCATGCTAAATCTCAAACGGCACCACCAGCTCAGATGCCTCAGCATCGGACAGGAAGCGCGTTTACCAAGCAGCAGCTTCATGTTCTTAAAGCCCAAATACTTGCATTTAGGCGGCTGAAGAAAGGGGAAGGTACTCTGCCTCAAGAACTTCTACGTGCTATTGCTCCGCCGCCTCTTGAGATGCAGGTGCAACATTCAAATCATCTCACGGGAGGACAAAATCAAGACAAACCTTCTGGCAGTATCGCGGCAGAACAACCAAGGCACACTGAACCCAATGCGAAGGATTCACAATCTATCCCAGCTATTAATGGACAGAGTTCTTTAAAGCAGGAACCCTTTCCCAGAGAAGAGAAATCCGTTGTACCACCGGTTCCTGTGCAAGCTGTTATGCCACCTGCACCAAAGGAATCTGCTCCAACATTATCTGCTGGAAAGGAAGAGCAGAAATCAGTTGCATGCCCTGATAAGTCAGACCAGGACAGGGACAGTGATCGTGGAAAGAACAGAACTCCTCCTAGGAATGATTTAGTGCTGGATAGGGGAAAGGCGGTTGCACCGCAGGCTTCTGTATCCGACTCAACCCAAATTAAGAAATCGGCACAAACAAGCACTGTTTCCCAGCCAAAGGATGCGGCATCTACTAGAAAATATTGCGGACCCCTATTTGATTTTCCTTCATTCACTAGGAAACATGACTCTTTTGGGTCATCGATGATGGTAAACAATAATAATAATCTGTCACTGGCATATGATGTCAAAGATCTTCTTTTAGAGGAAGGCATGGAAGTACTTAACAAGAAACGTACAGAAAATTTAAAGAAGATTGAAGGGTTGTTGGCAGTGAACTTAGAGAGGAAAAGGATTAGGCCAGATCTTGTGTTAAGGCTACAGATTGAAGAAAAAAAGCTTCGCCTTGTAGACCTTCAGGCACGTTTAAGGGACGAGATTGATCAACAGCAACAAGAGATAATGGCAATGCCGGATAGGCCATATCGTAAGTTCGTAAGGCTGTGTGAGCGTCAGCGTATGGAACTTGCTAGACAAGTGCAGGCATCTCAGAGAGCTTTGAGGGAGAAGCAGCTTAAATCTATATTTCAATGGCGTAAGAAGCTTCTTGAGACGCATTGGGCTATTCGTGATGCCCGTACTGCCCGCAACAGGGGTGTGGGTAAATATCACGAGAGGATGATGAGGGAATTTTCAAAACGTAAAGATGATGACAGAAACAAAAGGATGGAAGCCTTAAAGAACAATGATGTTGACCGATATAGAGAGATGTTACTGGAGCAACAGACTAGCATGCCAGGCGATGCTGCAGAAAGATATGCTGTTCTCTCAACTTTCTTAACTCAGACAGAAGAGTATCTGCATAAATTAGGAAGTAAGATAACTGCTGCCAAAAATCAACAGGAAGTGGAGGAGGCAGCAAAATCTGCTGCTGCTGCTGCACGATTGCAGGGTCTTTCTGAGGAAGAAGTAAGAGCTGCTGCAGCTTGTGCAGGGGAGGAAGTAATGATTAGAAATCGTTTTCTGGAGATGAATGCTCCTAGGGACAGTTCATCTGTCAACAAGTATTACAACCTTGCTCATGCTGTGAGTGAAACTGTGATTAGGCAACCATCAATGTTACGTGCTGGAACATTGAGAGACTATCAACTTGTTGGTTTACAATGGATGCTTTCTTTGTACAATAACAAGTTGAATGGAATTTTGGCGGATGAGATGGGTCTTGGAAAAACTGTGCAGGTTATGGCATTGATTGCATACTTGATGGAATTTAAAGGAAACTATGGCCCGCATCTTATAATAGTACCGAATGCTGTTTTAGTTAACTGGAAGAGCGAGTTTTATAATTGGCTACCATCTGTGTCGTGCATTTTTTATGTTGGAAGCAAGGATCAACGGTCAAAATTATTTTCACAAGAGGTTTGTGCTATGAAGTTTAATGTCCTTGTGACTACTTATGAGTTCATCATGTATGATCGATCAAAGCTTTCAAAAGTCGATTGGAAGTATATCATAATTGATGAAGCACAGAGAATGAAGGATAGGGATTCAGTCCTGGCCCGTGATCTTGATAGGTACCGTTGTCAAAGGCGCCTGCTTTTGACAGGAACACCATTACAGAACGATTTGAAGGAACTCTGGTCACTTCTAAATTTACTTCTTCCTGAGGTTTTTGACAATAGGAAAGCCTTCCATGATTGGTTCTCTAAACCATTTCAAAAGGAAGGTCCTGCTCCAACCCAAAATGGGGAGGATGATTGGCTTGAGACTGAGAAGAAAGTTATCATTATCCACCGACTTCATCAGATTCTTGAGCCTTTCATGCTCAGGCGTCGTGTTGAAGATGTTGAAGGCTCACTTCCACCTAAGGTCTCGATAGTTCTAAAATGCAAAATGTCCGCTGTTCAAAGCGCAATTTATGATTGGGTCAAATCAACTGGTACCCTTCGTCTTGATCCTGAGGATGAGAAGCGTAGGGTTCTAAAGAATCCGGTCTACCAGGTGAAGCAATATAAAACTTTAAACAACAGATGCATGGAGCTCCGCAAAACTTGCAATCATCCGTTGCTTAATTATCCCTTCTTCAATGACTTATCTAAAGATTTCCTAGTAAAATCTTGTGGAAAATTGTGGATCCTGGATAGAATTCTCATTAAACTTCAAAGAACAGGACATCGAGTTCTACTGTTTAGTACCATGACAAAACTCCTAGACATCTTGGAAGAATACCTGCAATGGCGAAGACTTGTGTACAGAAGAATTGATGGTACAACCAGTTTGGAAGATCGTGAGTCGGCTATAGTTGACTTCAATAGCCCTGATTCAGATTGCTTCATCTTCTTGCTTAGCATTCGAGCTGCTGGACGAGGTCTGAACCTTCAGTCTGCTGATACAGTTGTTATATATGATCCTGATCCAAACCCTAAAAATGAGGAGCAGGCTGTTGCCAGAGCTCATCGGATTGGACAGAAAAGAGAGGTTAAAGTTATCTATATGGAAGCCGTTGTTGACAAGATCGCTAGCCATCAGAAGGAGGATGAAATGAGAAGTGGAGGCACTGTTGACATGGAGGATGAACTTGCAGGTAAGGATCGCTACATAGGATCTATTGAGAGCCTCATAAGGAACAATATTCAACAATATAAGATAGATATGGCTGATGAGGTTATTAATGCTGGACGCTTTGATCAAAGAACAACACATGAAGAGAGGCGTTTGACACTTGAGACATTATTGCATGATGAAGAGAGGTATCAAGAAACTGTCCATGACGTTCCGTCATTGCAGGAGGTAAATCGAATGATTGCCAGGAGCGAAGAGGAAGTGGAACTGTTTGATCAAATGGATGAAGAGGAGGATTGGATTGAGGAGATGACAAGGTTTGATCAAGTACCCAAGTGGCTTCGAGCCAACACAAGGGAGGTGAATGCTGCTGTTGCTGCGCTGTCAAAAAGACCGTCAAAGAACATTTTAACTGGTGGTACAATACCTGTGGAACCTGGTGAAGAAAGGAAAAGAGGACGGCCCAAGGGGAAAAAGCATCTAAGTTACAAAGAAGTAGATGATGAGACTGGAGAGTACTCCGAAGCAAGCTCTGATGAAAGAAATGGATATGCACATGAAGAAGGTGAAATAGGAGAATTTGAAGACGATGGGTATAGTGGTCCTGATGGACCTCAACCCATCGATAAAGATCAGTTGGAAGATGGTATACTTTGCGAGGCTGCCGGTTATACATTTCCTAGATCTTTGGAAAGCGCTGGAAATAATCAGATGGTTGAAGAGGCTGGTTCCTCAGGATCATCCTCAGACAGTCAAAGAGTGATCCAGACGGTATCTCCATCAGTTTCCTCTCAGAAATTTGGTTCACTTTCTGCACTAGATGCCAGGCCAAGTTCCATACCAAGAAAGATGACAGATGAGTTGGAAGAAGGGGAAATTGCTGTTTCTGGTGATTCTCACATGGATCATCAACAGTCTGGCAGTTGGATTCATGATCGTGATGAAGGTGAGGATGAACAAGTTTTGCAGCAACCCAAGATTAAACGTAAACGTAGCATGCGCGTTCGACCCCGTCTTGTTGCTGATAAACATGAAGAAAAGCCTGTCAATGAAATGGCATCTCATTTAGCAATACAAGCAGAACATAAATATCAATCACAGCCAATGGCCGACATAGAATCAAAACGATTGGTTGAATCCAAACCAGGCAGGCATGATTTAAATGCATCATTAAAAAATAAGCGAAGTTTACCTCAAAGGAGAGTTGCCAATACATCCAAATTACATGGCTCACCAAAGTCTAGTAAGGGTATGTGTCATCAATCGACTCTTTCGATGTCTCTTTCTACAATGACAGTCTTTTTTGTTAGCGTGTGCAAAAATGTAATTAGCAAGCTACAAAGGCGAATAGACAAGGAAGGTCAACAAATTGTGCCCTTGTTAACGGATTTGTGGAAGAGAATTGAGAATTCTGGGTACAGTAGTGGATCCGGGAACAGCCTGTTGGATTTAAGAAAGATTGACCAGCGGATTGATAGATTGGAGTATAATGGAGCAACAGAGCTTGTATTTGATGTGCAGTTCATGCTAAAGAGCGCAATGCAATTTTACGGCTTTTCGCATGAGGTAAGAACTGAAGCGAGGAAGGTTCATGATCTATTTTTCGATATCTTGAAAATCGCATTTCCTGATACGGACTTCCGAGATGCAAGAAGTGCGCTTTCTTTCGCCGCCAGTACTGTAACATCCCCAAGGCAAGGAGCTGTTGGTCTAGGCAAGAGGCACCGGTTGATAAATGAGGTGGAAGCCGATCAATACCCTTCACCGAAGCCACTGCAACGCGGTTCCGCTTCTGGTGGTGAAAACAGTCGGGTCAAAGGCCATGGCCTGCAAAAGGAATCAAGGGCCGGAAGTGGCAGCACCCGGGAACAGCTTCAGCCGGATGATTATCCAGTGCTGACTCATCCAGGTGAACTTGTGGTTTGCAAGAAGAGAAGGAACGATAGGGGGGAGAAATCATTGGTGAAGCTGAGGACCGGCCCCGTGTCGCCAACTAGCATGGTTCCGGCTATGCGAAGCCCGGGGTCAGGTTCAACTCCTAGGGATGCTAGACTAGCGCATCAGTCTCCTCATGCACAAGGGTTGGTTGGCCAGCCATTTCAGCAGCCAAACGGCTCCGGTGGTTCGGTTGGTTGGGCAAACCCCGTAAAGCGGCTACGGACGGATTCTGGGAAGAGGAGACCAAGCCATATGTAG 6645 0.4531 MQSGGGGRNPGVGRTGSTATSSAAASPSSSSSASQLGLDQHHLQQQQQQQQQQQISSSRQSFQQQLLRKPEGNEAFLAYQAGLQGAFGNNNFSSPGAMQLPQQSRKFMELAQHGASQDGQFRAQGVEQQMMNPMHQACLQYALAQQKSAMGIQSQQQAKMGMLNPSLKDQEMRVANLKMQEMMAMQAMHQAQGSSSRNSSEHVSRGEKQIEPGQQTAPDQKTEGKPLSQGPAIGHVMPGNVVRPMHVPESQQGIQNFMAMSAQYQAMQAWARERNIDLSHPANANIMSQLIPMMQARMASQQKVNESNVGVQSTPVPVSRQQVTSPAVGSEGSAHANSSSEASGQSGSSKARQSVPPGHFGPTTNSGIGSGSSDMVMQQLGPQGRESPASLRQPVSVGNGMPSVHPHQSSANRNSGAEHPMGAKTSSSGSEPPQMQNLRQVNQSSSQAGVPTNEGGSGSHAKSQTAPPAQMPQHRTGSAFTKQQLHVLKAQILAFRRLKKGEGTLPQELLRAIAPPPLEMQVQHSNHLTGGQNQDKPSGSIAAEQPRHTEPNAKDSQSIPAINGQSSLKQEPFPREEKSVVPPVPVQAVMPPAPKESAPTLSAGKEEQKSVACPDKSDQDRDSDRGKNRTPPRNDLVLDRGKAVAPQASVSDSTQIKKSAQTSTVSQPKDAASTRKYCGPLFDFPSFTRKHDSFGSSMMVNNNNNLSLAYDVKDLLLEEGMEVLNKKRTENLKKIEGLLAVNLERKRIRPDLVLRLQIEEKKLRLVDLQARLRDEIDQQQQEIMAMPDRPYRKFVRLCERQRMELARQVQASQRALREKQLKSIFQWRKKLLETHWAIRDARTARNRGVGKYHERMMREFSKRKDDDRNKRMEALKNNDVDRYREMLLEQQTSMPGDAAERYAVLSTFLTQTEEYLHKLGSKITAAKNQQEVEEAAKSAAAAARLQGLSEEEVRAAAACAGEEVMIRNRFLEMNAPRDSSSVNKYYNLAHAVSETVIRQPSMLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSEFYNWLPSVSCIFYVGSKDQRSKLFSQEVCAMKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRDSVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSKPFQKEGPAPTQNGEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLKCKMSAVQSAIYDWVKSTGTLRLDPEDEKRRVLKNPVYQVKQYKTLNNRCMELRKTCNHPLLNYPFFNDLSKDFLVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSPDSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEAVVDKIASHQKEDEMRSGGTVDMEDELAGKDRYIGSIESLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRLTLETLLHDEERYQETVHDVPSLQEVNRMIARSEEEVELFDQMDEEEDWIEEMTRFDQVPKWLRANTREVNAAVAALSKRPSKNILTGGTIPVEPGEERKRGRPKGKKHLSYKEVDDETGEYSEASSDERNGYAHEEGEIGEFEDDGYSGPDGPQPIDKDQLEDGILCEAAGYTFPRSLESAGNNQMVEEAGSSGSSSDSQRVIQTVSPSVSSQKFGSLSALDARPSSIPRKMTDELEEGEIAVSGDSHMDHQQSGSWIHDRDEGEDEQVLQQPKIKRKRSMRVRPRLVADKHEEKPVNEMASHLAIQAEHKYQSQPMADIESKRLVESKPGRHDLNASLKNKRSLPQRRVANTSKLHGSPKSSKGMCHQSTLSMSLSTMTVFFVSVCKNVISKLQRRIDKEGQQIVPLLTDLWKRIENSGYSSGSGNSLLDLRKIDQRIDRLEYNGATELVFDVQFMLKSAMQFYGFSHEVRTEARKVHDLFFDILKIAFPDTDFRDARSALSFAASTVTSPRQGAVGLGKRHRLINEVEADQYPSPKPLQRGSASGGENSRVKGHGLQKESRAGSGSTREQLQPDDYPVLTHPGELVVCKKRRNDRGEKSLVKLRTGPVSPTSMVPAMRSPGSGSTPRDARLAHQSPHAQGLVGQPFQQPNGSGGSVGWANPVKRLRTDSGKRRPSHM 2214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00082 2214 MobiDBLite consensus disorder prediction 1722 1743 - -
Arst2g00082 2214 Coils Coil 1557 1577 - -
Arst2g00082 2214 Pfam SNF2-related domain 1011 1317 IPR000330 GO:0005524|GO:0140658
Arst2g00082 2214 Gene3D - 999 1249 IPR038718 -
Arst2g00082 2214 FunFam ATP-dependent helicase BRM 1250 1460 - -
Arst2g00082 2214 MobiDBLite consensus disorder prediction 609 636 - -
Arst2g00082 2214 MobiDBLite consensus disorder prediction 1643 1668 - -
Arst2g00082 2214 Gene3D - 1250 1460 IPR027417 -
Arst2g00082 2214 MobiDBLite consensus disorder prediction 209 223 - -
Arst2g00082 2214 SMART QLQ_2 478 515 IPR014978 GO:0005524|GO:0005634|GO:0006355
Arst2g00082 2214 MobiDBLite consensus disorder prediction 1875 1903 - -
Arst2g00082 2214 MobiDBLite consensus disorder prediction 1788 1809 - -
Arst2g00082 2214 MobiDBLite consensus disorder prediction 527 672 - -
Arst2g00082 2214 ProSiteProfiles QLQ domain profile. 479 515 IPR014978 GO:0005524|GO:0005634|GO:0006355
Arst2g00082 2214 MobiDBLite consensus disorder prediction 1781 1817 - -
Arst2g00082 2214 Pfam Helicase conserved C-terminal domain 1340 1451 IPR001650 -
Arst2g00082 2214 SUPERFAMILY Bromodomain 1965 2024 IPR036427 GO:0005515
Arst2g00082 2214 MobiDBLite consensus disorder prediction 2177 2192 - -
Arst2g00082 2214 Pfam QLQ 479 513 IPR014978 GO:0005524|GO:0005634|GO:0006355
Arst2g00082 2214 MobiDBLite consensus disorder prediction 298 477 - -
Arst2g00082 2214 MobiDBLite consensus disorder prediction 1675 1694 - -
Arst2g00082 2214 PANTHER SNF2/RAD54 HELICASE FAMILY 716 1785 - -
Arst2g00082 2214 MobiDBLite consensus disorder prediction 2063 2115 - -
Arst2g00082 2214 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1341 1518 IPR001650 -
Arst2g00082 2214 MobiDBLite consensus disorder prediction 13 66 - -
Arst2g00082 2214 MobiDBLite consensus disorder prediction 186 239 - -
Arst2g00082 2214 SMART ultradead3 1004 1193 IPR014001 -
Arst2g00082 2214 MobiDBLite consensus disorder prediction 1617 1668 - -
Arst2g00082 2214 MobiDBLite consensus disorder prediction 1 66 - -
Arst2g00082 2214 Coils Coil 758 782 - -
Arst2g00082 2214 Gene3D - 1914 2024 IPR036427 GO:0005515
Arst2g00082 2214 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 988 1240 IPR027417 -
Arst2g00082 2214 FunFam Brahma1 1913 2036 - -
Arst2g00082 2214 SMART helicmild6 1367 1451 IPR001650 -
Arst2g00082 2214 MobiDBLite consensus disorder prediction 647 671 - -
Arst2g00082 2214 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1244 1581 IPR027417 -
Arst2g00082 2214 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1020 1185 IPR014001 -
Arst2g00082 2214 SMART bromo_6 1911 2026 IPR001487 GO:0005515
Arst2g00082 2214 MobiDBLite consensus disorder prediction 2142 2214 - -
Arst2g00082 2214 Coils Coil 802 822 - -
Arst2g00082 2214 CDD SF2_C_SNF 1336 1461 - -
Arst2g00082 2214 MobiDBLite consensus disorder prediction 1862 1903 - -
Arst2g00082 2214 MobiDBLite consensus disorder prediction 552 570 - -
Arst2g00082 2214 FunFam ATP-dependent helicase BRM 999 1249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00082 Arst-Chr2 601474 612297 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00082 1029 1476 RAD5 or RAD16-like Gene Family AT1G02670 26.012 1.85e-29 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Arst2g00082 SNF2_N 1.1e-65 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00082 K11647 - gmx:100807104 3383.96