Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00072 ATGGCTGTGGTGAGTCCTATGAGTCCTGCTATGGCTACAACTCCACACCAGGTCTATCCCACGACGCCTCTTCGTGGAAGCGAGGTTCCATGGATCATGAGTGGCATGAGAGAAGCTGCAGAGGCATCTAGTCCAAATGTGGTTGATGACATTATCCATGTTGCTGTGGCAAAAGATGTGAAAGATAGCAGGTTGAATCTGATTTGGGCAATACAAAATTCTGGAGGAAAGAGGATTTGCATCCTTTATGTTCATGTGCCAGCAGCTACAATCCCCATAACCGGAGAGCATCGAGTTCAAGAACATCGAGAAAATGAAGAGCAAGGCATGCGTAATATTCTGAATGACTATCTTCTTATCTGCCAAAAAATGGGGGTTAAGGCAAACAAACTTCATATTACTGACAAGGATTGCATTGAGAAAGGGATTGTAGAACTCATCTGCAAGCATAATATCAAGAAGCTTGTGATGGGAGCAGCTTCTGATAAGTACTATTCTAGGAGAATGACAGATCTCAGGTCTAGGAAAGCCATTTATGTGAGAGAAAATGCTCCTGCTTATTGTCATATACAGTTCATCTGCAAAGGATACCTTATACACACAAGGAATCTCAGTTTGGATGGAGGTAATGTAGAGGTCAGGTCTCCTTTGTCACCTCAAACGCCTAGCCGTTCGCCTTCACTTGGACAACAATTATATCGCCGAGTAAGATCTGTTAACGAAAGAAATGGAGGGAGAATGTCACTTGCTTCTCCAATCAGGTTTCTCATGCAACCAAACAGGTTTGGTAGAGAAGGAACTTCTAATGGCTCAGATGTACTGTCTAGGCCAGCAAGTCCTTTGGTTTCATCAACAAGTTCTGTTAATTTCATTAGTGAGCTAAGTGAGAATGCATCAGCCTTGAATTCGAGTAGTCCTAAAGCGATTCAAGCATCTTCTAGCAGGCTGCAGGATAGTGAAATGGATGAGACTCTCTATGATCAACTCCAACAGGCCATGGCTGAAGCTGAGAATGCAAGGCAGGATGCTTATCAAGAGAGTATTAGGCGTGGGAATGCTGAAAGGAATGCCATTGAAGCGATTCGCAGGGCTAAAGCAGCTGAAATGAAGTATGAAGAGGAGGTGAAATTGAGGAAAGAATTAGAGGAAGCAATAAAAAGAGAAAAGGAAGAAATAGATTGCATGAAAAGCCAAAGAGAGAAGCTTAATGAAGAACTCCAGCATGCCTTGCACAAGAATTCATTGCTAGAAAGTAAAATGGCATCAACTCAACTTATGCTAGAGGAGTTAGATCAGAAGAACAAATCTGCTATGGACACATTAGAAAAGTACAAGCAAGAGCGCGAGGATTTGCAAACGCAGCGCGATAATGCCTTAAAAGAAGCTGAGGACTTGAGGAGAGAAAAACAAGAAGAGGCCTCAACCTCACATGTATTTCAACTCTTCTCAGAATTTTCTTTTGCTGAGATTAAAGAAGCTACCAATAACTTCAGTCCATCCCAAAAGATTGGAGAAGGCGGATATGGAAGTATATATAAAGGTATCCTTCGCCAAACTGAGGTAGCTGTGAAAATGTTGAGCCCAGACAGCAAGCAAGGACCTAAAGAGTATCAACAGGAGGTTGAGGTACTAAGCAAGTTAAGGCATCCCAATCTGATCACACTAATAGGAACCTGCCCAGAATCTTGGACTCTTGTCTATGAGTATTTATCCAATGGAAGCCTAGAAGATCGTCTCAGCTGCGAAGATAACACGCCTCCATTATCATGGCAAACTAGAATTCGCATTGCTGCAGAAGTGTGCTCTACTCTAGTGTGTCTCCATTCTAATAGATCTCACAGCATAGTTCATGGTGATTTAAAACCAGCCAACATTCTCCTTGATGCTAACCTTGTTAGCAAGCTAAGTGACTTTGGAATCTCAAGATTACTATCGTGTCGCGAGGATTCTACTACACAGTTTTGGATAACTGATCCAAAGGGAACTTTTGCATATATGGACCCTGAATTCTTTGCTTCAGGGGAACTTACACCAAAGTCTGATGTTTATTCTTTTGGAATCATATTACTAAAACTATTGACTGGTAGACCAGCTGTGGGAATATCAAAGGTAGTTGAATCTGCTTTAGATGCTGGAAAGTTGAATTCTCTCTTGGATCCCTTGGCCGGAGACTGGCCATTAGCACTGGCCGAAAAGCTTGCTCGCTTGGCTTTGAGGTGTTGCGAAATGGAGCGAAAGAACCGGCCGGATCTTCATCTGGAAGTATGGAGAATACTTGAACCTATGAAGGCTCCTTTGAGTGGAGAAAACAGATTAGGACTTGGTTCTCAAGAGCTTTGCCAACCCCCTCCTTATTTCATTTGTCCAATTTTCAAGGAAGTCATGAGAGATCCTCACATGGCAGCAGATGGTCATACTTATGAAGCCGAGGCCATACGAGGATGGCTGGACAGCGGCCGTGACACTTCGCCGGTGACAAATTCTAAGCTTGTAATGCACAATCTTGTTCCTAACCATGCTCTCCGCCATGCAATTCAAGACTGGCTTGAAAGCTGA 2556 0.4308 MAVVSPMSPAMATTPHQVYPTTPLRGSEVPWIMSGMREAAEASSPNVVDDIIHVAVAKDVKDSRLNLIWAIQNSGGKRICILYVHVPAATIPITGEHRVQEHRENEEQGMRNILNDYLLICQKMGVKANKLHITDKDCIEKGIVELICKHNIKKLVMGAASDKYYSRRMTDLRSRKAIYVRENAPAYCHIQFICKGYLIHTRNLSLDGGNVEVRSPLSPQTPSRSPSLGQQLYRRVRSVNERNGGRMSLASPIRFLMQPNRFGREGTSNGSDVLSRPASPLVSSTSSVNFISELSENASALNSSSPKAIQASSSRLQDSEMDETLYDQLQQAMAEAENARQDAYQESIRRGNAERNAIEAIRRAKAAEMKYEEEVKLRKELEEAIKREKEEIDCMKSQREKLNEELQHALHKNSLLESKMASTQLMLEELDQKNKSAMDTLEKYKQEREDLQTQRDNALKEAEDLRREKQEEASTSHVFQLFSEFSFAEIKEATNNFSPSQKIGEGGYGSIYKGILRQTEVAVKMLSPDSKQGPKEYQQEVEVLSKLRHPNLITLIGTCPESWTLVYEYLSNGSLEDRLSCEDNTPPLSWQTRIRIAAEVCSTLVCLHSNRSHSIVHGDLKPANILLDANLVSKLSDFGISRLLSCREDSTTQFWITDPKGTFAYMDPEFFASGELTPKSDVYSFGIILLKLLTGRPAVGISKVVESALDAGKLNSLLDPLAGDWPLALAEKLARLALRCCEMERKNRPDLHLEVWRILEPMKAPLSGENRLGLGSQELCQPPPYFICPIFKEVMRDPHMAADGHTYEAEAIRGWLDSGRDTSPVTNSKLVMHNLVPNHALRHAIQDWLES 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00072 851 ProSiteProfiles Protein kinase domain profile. 497 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst2g00072 851 CDD RING-Ubox_WDSUB1-like 783 838 - -
Arst2g00072 851 Pfam Protein kinase domain 499 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst2g00072 851 SUPERFAMILY Protein kinase-like (PK-like) 474 751 IPR011009 -
Arst2g00072 851 Gene3D Transferase(Phosphotransferase) domain 1 570 769 - -
Arst2g00072 851 Coils Coil 364 475 - -
Arst2g00072 851 CDD STKc_IRAK 503 762 - -
Arst2g00072 851 FunFam receptor-like protein kinase FERONIA 460 569 - -
Arst2g00072 851 SUPERFAMILY RING/U-box 777 850 - -
Arst2g00072 851 SMART Ubox_2 785 848 IPR003613 GO:0004842|GO:0016567
Arst2g00072 851 MobiDBLite consensus disorder prediction 447 471 - -
Arst2g00072 851 CDD STK_N 51 196 - -
Arst2g00072 851 Pfam U-box domain 783 850 IPR003613 GO:0004842|GO:0016567
Arst2g00072 851 ProSitePatterns Protein kinases ATP-binding region signature. 503 524 IPR017441 GO:0005524
Arst2g00072 851 MobiDBLite consensus disorder prediction 262 281 - -
Arst2g00072 851 SMART serkin_6 497 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst2g00072 851 ProSitePatterns Serine/Threonine protein kinases active-site signature. 615 627 IPR008271 GO:0004672|GO:0006468
Arst2g00072 851 MobiDBLite consensus disorder prediction 260 281 - -
Arst2g00072 851 MobiDBLite consensus disorder prediction 299 319 - -
Arst2g00072 851 Coils Coil 319 346 - -
Arst2g00072 851 Gene3D Phosphorylase Kinase; domain 1 465 569 - -
Arst2g00072 851 PANTHER OS02G0152300 PROTEIN 52 847 - -
Arst2g00072 851 ProSiteProfiles U-box domain profile. 781 851 IPR003613 GO:0004842|GO:0016567
Arst2g00072 851 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 781 851 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00072 Arst-Chr2 502982 507701 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00072 47 850 U-box Gene Family AT2G45910 53.497 0.0 833
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Arst2g00072 Pkinase 2.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00072 - - adu:107472426 1628.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g03208 4 109216625 109221756 Arst2g00072 2 502982 507701 PCT