Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00071 ATGGCTGTGGTGAGTCCTATGAGTCCTGCTATGGCTACAACTCCACACCAGGTCTATCCCACGACGCCTCTTCGTGGAAGCGAGGTTCCATGGATCATGAGTGGCATGAGAGAAGCTGCAGAGGCATCTAGTCCAAATGTGGTTGATGACATTATCCATGTTGCTGTGGCAAAAGATGTGAAAGATAGCAGGTTGAATCTGATTTGGGCAATACAAAATTCTGGAGGAAAGAGGATTTGCATCCTTTATGTTCATGTGCCAGCAGCTACAATCCCCATAAAAAGTGCAGCCGGAGAGCATCGAGTTCAAGAACATCGAGAAAATGAAGAGCAAGGCATGCGTAATATTCTGAATGACTATCTTCTTATCTGCCAAAAAATGGGGGTTAAGGCAAACAAACTTCATATTACTGACAAGGATTGCATTGAGAAAGGGATTGTAGAACTCATCTGCAAGCATAATATCAAGAAGCTTGTGATGGGAGCAGCTTCTGATAAGTACTATTCTAGGAGAATGACAGATCTCAGGTCTAGGAAAGCCATTTATGTGAGAGAAAATGCTCCTGCTTATTGTCATATACAGTTCATCTGCAAAGGATACCTTATACACACAAGGAATCTCAGTTTGGATGGAGGTAATGTAGAGGTCAGGTCTCCTTTGTCACCTCAAACGCCTAGCCGTTCGCCTTCACTTGGACAACAATTATATCGCCGAGTAAGATCTGTTAACGAAAGAAATGGAGGGAGAATGTCACTTGCTTCTCCAATCAGGTTTCTCATGCAACCAAACAGGTTTGGTAGAGAAGGAACTTCTAATGGCTCAGATGTACTGTCTAGGCCAGCAAGTCCTTTGGTTTCATCAACAAGTTCTGTTAATTTCATTAGTGAGCTAAGTGAGAATGCATCAGCCTTGAATTCGAGTAGTCCTAAAGCGATTCAAGCATCTTCTAGCAGGCTGCAGGATAGTGAAATGGATGAGACTCTCTATGATCAACTCCAACAGGCCATGGCTGAAGCTGAGAATGCAAGGCAGGATGCTTATCAAGAGAGTATTAGGCGTGGGAATGCTGAAAGGAATGCCATTGAAGCGATTCGCAGGGCTAAAGCAGCTGAAATGAAGTATGAAGAGGAGGTGAAATTGAGGAAAGAATTAGAGGAAGCAATAAAAAGAGAAAAGGAAGAAATAGATTGCATGAAAAGCCAAAGAGAGAAGCTTAATGAAGAACTCCAGCATGCCTTGCACAAGAATTCATTGCTAGAAAGTAAAATGGCATCAACTCAACTTATGCTAGAGGAGTTAGATCAGAAGAACAAATCTGCTATGGACACATTAGAAAAGTACAAGCAAGAGCGCGAGGATTTGCAAACGCAGCGCGATAATGCCTTAAAAGAAGCTGAGGACTTGAGGAGAGAAAAACAAGAAGAGGCCTCAACCTCACATGTATTTCAACTCTTCTCAGAATTTTCTTTTGCTGAGATTAAAGAAGCTACCAATAACTTCAGTCCATCCCAAAAGATTGGAGAAGGCGGATATGGAAGTATATATAAAGGTATCCTTCGCCAAACTGAGGTAGCTGTGAAAATGTTGAGCCCAGACAGCAAGCAAGGACCTAAAGAGTATCAACAGGAGGTTGAGGTACTAAGCAAGTTAAGGCATCCCAATCTGATCACACTAATAGGAACCTGCCCAGAATCTTGGACTCTTGTCTATGAGTATTTATCCAATGGAAGCCTAGAAGATCGTCTCAGCTGCGAAGATAACACGCCTCCATTATCATGGCAAACTAGAATTCGCATTGCTGCAGAAGTGTGCTCTACTCTAGTGTGTCTCCATTCTAATAGATCTCACAGCATAGTTCATGGTGATTTAAAACCAGCCAACATTCTCCTTGATGCTAACCTTGTTAGCAAGCTAAGTGACTTTGGAATCTCAAGATTACTATCGTGTCGCGAGGATTCTACTACACAGTTTTGGATAACTGATCCAAAGGGAACTTTTGCATATATGGACCCTGAATTCTTTGCTTCAGGGGAACTTACACCAAAGTCTGATGTTTATTCTTTTGGAATCATATTACTAAAACTATTGACTGGTAGACCAGCTGTGGGAATATCAAAGGTAGTTGAATCTGCTTTAGATGCTGGAAAGTTGAATTCTCTCTTGGATCCCTTGGCCGGAGACTGGCCATTAGCACTGGCCGAAAAGCTTGCTCGCTTGGCTTTGAGGTGTTGCGAAATGGAGCGAAAGAACCGGCCGGATCTTCATCTGGAAGTATGGAGAATACTTGAACCTATGAAGGCTCCTTTGAGTGGAGAAAACAGATTAGGACTTGGTTCTCAAGAGCTTTGCCAACCCCCTCCTTATTTCATTTGTCCAATTTTCAAGGAAGTCATGAGAGATCCTCACATGGCAGCAGATGGTCATACTTATGAAGCCGAGGCCATACGAGGATGGCTGGACAGCGGCCGTGACACTTCGCCGGTGACAAATTCTAAGCTTGTAATGCACAATCTTGTTCCTAACCATGCTCTCCGCCATGCAATTCAAGACTGGCTTGAAAGCTGA 2565 0.4308 MAVVSPMSPAMATTPHQVYPTTPLRGSEVPWIMSGMREAAEASSPNVVDDIIHVAVAKDVKDSRLNLIWAIQNSGGKRICILYVHVPAATIPIKSAAGEHRVQEHRENEEQGMRNILNDYLLICQKMGVKANKLHITDKDCIEKGIVELICKHNIKKLVMGAASDKYYSRRMTDLRSRKAIYVRENAPAYCHIQFICKGYLIHTRNLSLDGGNVEVRSPLSPQTPSRSPSLGQQLYRRVRSVNERNGGRMSLASPIRFLMQPNRFGREGTSNGSDVLSRPASPLVSSTSSVNFISELSENASALNSSSPKAIQASSSRLQDSEMDETLYDQLQQAMAEAENARQDAYQESIRRGNAERNAIEAIRRAKAAEMKYEEEVKLRKELEEAIKREKEEIDCMKSQREKLNEELQHALHKNSLLESKMASTQLMLEELDQKNKSAMDTLEKYKQEREDLQTQRDNALKEAEDLRREKQEEASTSHVFQLFSEFSFAEIKEATNNFSPSQKIGEGGYGSIYKGILRQTEVAVKMLSPDSKQGPKEYQQEVEVLSKLRHPNLITLIGTCPESWTLVYEYLSNGSLEDRLSCEDNTPPLSWQTRIRIAAEVCSTLVCLHSNRSHSIVHGDLKPANILLDANLVSKLSDFGISRLLSCREDSTTQFWITDPKGTFAYMDPEFFASGELTPKSDVYSFGIILLKLLTGRPAVGISKVVESALDAGKLNSLLDPLAGDWPLALAEKLARLALRCCEMERKNRPDLHLEVWRILEPMKAPLSGENRLGLGSQELCQPPPYFICPIFKEVMRDPHMAADGHTYEAEAIRGWLDSGRDTSPVTNSKLVMHNLVPNHALRHAIQDWLES 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00071 854 SMART Ubox_2 788 851 IPR003613 GO:0004842|GO:0016567
Arst2g00071 854 CDD RING-Ubox_WDSUB1-like 786 841 - -
Arst2g00071 854 Pfam Protein kinase domain 502 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst2g00071 854 Coils Coil 367 478 - -
Arst2g00071 854 SMART serkin_6 500 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst2g00071 854 MobiDBLite consensus disorder prediction 302 322 - -
Arst2g00071 854 ProSiteProfiles Protein kinase domain profile. 500 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst2g00071 854 MobiDBLite consensus disorder prediction 450 474 - -
Arst2g00071 854 ProSitePatterns Protein kinases ATP-binding region signature. 506 527 IPR017441 GO:0005524
Arst2g00071 854 CDD STKc_IRAK 506 765 - -
Arst2g00071 854 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 784 854 IPR013083 -
Arst2g00071 854 MobiDBLite consensus disorder prediction 265 284 - -
Arst2g00071 854 ProSiteProfiles U-box domain profile. 784 854 IPR003613 GO:0004842|GO:0016567
Arst2g00071 854 SUPERFAMILY RING/U-box 780 853 - -
Arst2g00071 854 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Arst2g00071 854 Gene3D Phosphorylase Kinase; domain 1 468 572 - -
Arst2g00071 854 MobiDBLite consensus disorder prediction 263 284 - -
Arst2g00071 854 Pfam U-box domain 786 853 IPR003613 GO:0004842|GO:0016567
Arst2g00071 854 SUPERFAMILY Protein kinase-like (PK-like) 477 754 IPR011009 -
Arst2g00071 854 FunFam receptor-like protein kinase FERONIA 463 572 - -
Arst2g00071 854 CDD STK_N 51 199 - -
Arst2g00071 854 Coils Coil 322 349 - -
Arst2g00071 854 PANTHER OS02G0152300 PROTEIN 52 850 - -
Arst2g00071 854 Gene3D Transferase(Phosphotransferase) domain 1 573 772 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00071 Arst-Chr2 502982 507701 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00071 47 853 U-box Gene Family AT2G45910 53.497 0.0 832
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Arst2g00071 Pkinase 2.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00071 - - adu:107472426 1634.77