Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00065 ATGGAGGAAGGAAGAGATATAGATCCAAGAAGTGGGTTCTGCAGCTCAAACTCAGTGTTCTACAGCAAAAGGAAGCCACTTCCACTTCCACAGAACCCATCCTTGGACGTCACCACCTTCATCTCATCACACGCCCACCATGGCAGGATCGCCTTCATCGACGCCGCCACCGGCAACCACTTCACCTTCCACCAACTCTGGCGAGCTGTGGACGCCGTCGCCTCCTCCCTCTACGACATCGGCATCCGCAAGGGCAACGTCGTCCTCCTCCTCTCCCCAAACAGCATCTACTTCCCCGTCGTCTGCCTGGCCGTCATGTCCCTCGGCGCCATCATCACCACCACCAACCCTCTCAACACCGCCGCCGAAATCCGCAAGCAAATCAACGACTCCAAGCCTCGCATCGCCTTCACCATCCCTCCTCTAGCCTCGAAAATCGCCGCCGCCTCCCCCTCGCTCCCGATCATCCTCATGGAGGCCGACACCAGCAGCAGCTTCCCTTCGGCCGTCACCACCCTCAGCCGCATGATGGAGAAAGAAAGCAGCTCAAGCCGAGTCAAAGAGCGAGTCAACCAGGACGACACGGCCACCCTGCTCTACTCTTCCGGCACCACCGGGCCCAGCAAGGGCGTCGTGTCTTCTCACCTCAACCTCATGGCTATGGTGCAGATCGTTCTCGGCAGATTCAACATCGAGGAGGGCCAGACCTTCATCTGCACTGTCCCAATGTTCCATATATACGGGCTGGTGGCGTTTGCGACGGGACTTCTGGCGGCGGGGGCGACAATCGTGGTGCTGTCAAAGTTCGAGATGCACGACATGTTGTCGGCGATAGAGAGGTACAAGGCGACGTACCTGCCGCTGGTGCCGCCGATTCTGGTAGCGATGCTCAACAACGCCGACGCGATTAAGGGAAAGTACGATTTGAGGTCTTTGCATTCGGTGCTTTCGGGTGGAGCGCCGCTGAGTAAAGAGGTGATAGAAGGCTTCGTGGAGAAGTATCCGAACGTGACCATTCTTCAGGGTTATGGCTTGACGGAGTCCACCGGAGTTGGTGCTTCCACCGACTCCTTGGAAGAGAGCCGCAGGTACGGTACGGCGGGGCTCCTCTCTCCGGGAACCCAGGCTAGGCTCAGGGGTCCCACCATCATGAAAGGTTATTTCAGTAACGAGGAAGCAACAGCGTCTACGCTTGATTCAGAAGGATGGTTAAGAACAGGGGATGTTTGCTTCATCGACAATGATGGCTTCATATTTATTGTGGATAGGTTGAAAGAGCTCATCAAGTACAAGGGATATCAGGTGCCTCCAGCAGAACTAGAGGCCTTGTTGCTCACACATCCAGACATTGCTGATGCTGCTGTCATTCCGTTTCCGGATAAGGAGGCTGGGCAGTTTCCAATGGCATATGTTGTAAGAAAGGCTGGAAGCAGCATTTCGGAGAAGGAAGTCATGGATTTTGTGGCAAAACAGGTGGCTCCATACAAGAGAATTAGAAAGGTCGCTTTTATATCTTCCGTACCCAAAAATCCATCTGGCAAGATTCTAAGGAGGGATCTCATCAACCTCGCAACCTCTAAACTCTGA 1587 0.5476 MEEGRDIDPRSGFCSSNSVFYSKRKPLPLPQNPSLDVTTFISSHAHHGRIAFIDAATGNHFTFHQLWRAVDAVASSLYDIGIRKGNVVLLLSPNSIYFPVVCLAVMSLGAIITTTNPLNTAAEIRKQINDSKPRIAFTIPPLASKIAAASPSLPIILMEADTSSSFPSAVTTLSRMMEKESSSSRVKERVNQDDTATLLYSSGTTGPSKGVVSSHLNLMAMVQIVLGRFNIEEGQTFICTVPMFHIYGLVAFATGLLAAGATIVVLSKFEMHDMLSAIERYKATYLPLVPPILVAMLNNADAIKGKYDLRSLHSVLSGGAPLSKEVIEGFVEKYPNVTILQGYGLTESTGVGASTDSLEESRRYGTAGLLSPGTQAKXLRGPTIMKGYFSNEEATASTLDSEGWLRTGDVCFIDNDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPDIADAAVIPFPDKEAGQFPMAYVVRKAGSSISEKEVMDFVAKQVAPYKRIRKVAFISSVPKNPSGKILRRDLINLATSKL 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00065 529 SUPERFAMILY Acetyl-CoA synthetase-like 44 527 - -
Arst2g00065 529 FunFam 4-coumarate--CoA ligase 2 427 528 - -
Arst2g00065 529 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 13 523 - -
Arst2g00065 529 Gene3D - 17 426 IPR042099 -
Arst2g00065 529 FunFam Long-chain-fatty-acid--CoA ligase FadD 21 426 - -
Arst2g00065 529 Pfam AMP-binding enzyme 45 431 IPR000873 -
Arst2g00065 529 Pfam AMP-binding enzyme C-terminal domain 440 515 IPR025110 -
Arst2g00065 529 Gene3D - 427 528 IPR045851 -
Arst2g00065 529 CDD 4CL 29 521 - -
Arst2g00065 529 ProSitePatterns Putative AMP-binding domain signature. 198 209 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00065 Arst-Chr2 461980 464767 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00065 7 529 Monolignol Biosynthesis Gene Families AT1G20500 62.591 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00065 K10526 - gmx:100811344 821.617