Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00056 ATGGCTTCTTCTTGGAGTCCAAAACATGAGAAGATGCAGAAGAGTTTGAGTACACAGTTAGCTGTGGCAGTAAGAAGTGTTCAATGGAGTTATGGAATTTTCTGGGCACCTTCAACAACCCAAGAAGGAGTGCTGGAATGGAGGGAAGGGTACTACAATGGAGACATTAAGACAATGAAGACAGTGCAAACAACAATGGAGATCAAGAATGACAAAATTGGAGTTCAGAGGAGTGAGCAGCTGAAGGAACTGTACAAGTTCCTTCTTGTTGGTGAATCTGATCCACAAACAAAAAGGCCTTCAGCTGCATTGTCTCCTGAGGATCTTTCAGATTCTGAGTGGTATTATTTGGTTTGCATGTCCTTTGTGTTCTATCCTAATCAAAGTTTGCCTGGTAGAGCACTAGAAATCGGCGAAACGATATGGTTATGCAATGCTCAATATGCAGATAGTAAAGTTTTCTCTCGTTCTTTACTTGCAAAGAGTGCATCAATTCAGACTGTGGTGTGCTTTCCCTATCTAGGGGGTGTTATTGAGATTGGTACAACTGAACTGGTGCCAGAGGACCCTAATCTTATTCAACATGTGAAGGCTTGTCTCTTGGAATTCTCAAAGCCTATTTGCTCTGATAAATCTTCATCAGCACTCAACAAGCCTGATGATGACAAACTTCAACCATGCTCCAATGGTGAACATGTTTTGGTTGACACAAAGGTTTTGGAGTACTCATGTTCCCCAGCTGAAGAAATCAAGCTTGATCAAGATCCTATCAAGGAACTGCAAGAAGATTCCAACATGGATTCTCCTGATGGATGTTCTAATGGTTGCGAGCACAACTGCCGTGTTGGAGAATCGATGGTTGAGGCAATCAATAATGGAGGGCCTTCTTCTCAAGTTCATTTCATGGATGATGATGATGCCTTGAGCAATGGTGCACCTGATTCCCTGAGTTCTTGTGATTGTCTATCCGAGGCGTCCGAGAACCGGGGAAAGGCTTCAAAGGATGTTCAACTAATCAGGGGAATTCAAAGCTTCAATCATTTGAATAGAAGTTCATTGGATGCAGCAGCAAGTGATGAACACTTGAGCTACACAAGAATACTCTCTGCTCTTCTTGGGAGATCATCGGCTTTCAAGCAGAATCCGTATGCTAGTAACTCAAATTGCAAATCAAGTTTCGTGAAATGGAAGAAAGGAGGAATCTGTGAGCAAAATCGGCTGCGGTTGGAGCAAAGCTTGTTGAAGAAGACTCTGTTTACTGTCCCTCTTATGCATAGGAGTTTCTCATCTATCAAATCAATGAAAGAAAATGAGACAAAAGAATGGACTAATAGATTGGAAAATGCTGATGACAAGTTCAGGGAAAATGTCCTATCTGATAAAATAAGAGAAACTGGAAACTTTAAGATTCTCAAGTCTTCAATTCCTCATCCTATAAGTGAGGTGGAGAAGATTTCGATCCTAGGTGACACAATTAAGTACTTGAAAGAGCTTGAGACAAGAGTGGAAGAACTAGAATCTTACATGGACATGGCGGATTCAGAAGCGAGAACCAAAAGAAAATGTCCAGATATGCTAGAGCAGATATCAGATAACTATGAAGCCAGAAAGGTTTACAATAAGGGAATGAGGAAGCCCTGGATGATGAACAAGAGAAAGGCTTGTGACATTGATGAAAAAAACATAGAAGAAATAGACAGATTTGTTGTGTCTAAAGAAGATAATAATAAGCCATTGGATGTGAAGGTTAACATGAAGGAGCAAGAGGTTTTGATTGAGATGCAATGTCCTTATAGAGAATATATATTGCATGATATCATGGATGCTATTAACAATCTGCACTTGGATGCTTACTCAGTTGAGTCATCAACAACTGAAGGTGTTCTTACATTGACACTTAAATCCAAGTTTCGAGGCACGGCGACTGCGCCGCTGGGAATGATCAAAGAAGCACTCTGGAAAGTGTCTGGAAATCTATGA 1980 0.4086 MASSWSPKHEKMQKSLSTQLAVAVRSVQWSYGIFWAPSTTQEGVLEWREGYYNGDIKTMKTVQTTMEIKNDKIGVQRSEQLKELYKFLLVGESDPQTKRPSAALSPEDLSDSEWYYLVCMSFVFYPNQSLPGRALEIGETIWLCNAQYADSKVFSRSLLAKSASIQTVVCFPYLGGVIEIGTTELVPEDPNLIQHVKACLLEFSKPICSDKSSSALNKPDDDKLQPCSNGEHVLVDTKVLEYSCSPAEEIKLDQDPIKELQEDSNMDSPDGCSNGCEHNCRVGESMVEAINNGGPSSQVHFMDDDDALSNGAPDSLSSCDCLSEASENRGKASKDVQLIRGIQSFNHLNRSSLDAAASDEHLSYTRILSALLGRSSAFKQNPYASNSNCKSSFVKWKKGGICEQNRLRLEQSLLKKTLFTVPLMHRSFSSIKSMKENETKEWTNRLENADDKFRENVLSDKIRETGNFKILKSSIPHPISEVEKISILGDTIKYLKELETRVEELESYMDMADSEARTKRKCPDMLEQISDNYEARKVYNKGMRKPWMMNKRKACDIDEKNIEEIDRFVVSKEDNNKPLDVKVNMKEQEVLIEMQCPYREYILHDIMDAINNLHLDAYSVESSTTEGVLTLTLKSKFRGTATAPLGMIKEALWKVSGNL 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00056 659 Coils Coil 432 452 - -
Arst2g00056 659 Coils Coil 495 515 - -
Arst2g00056 659 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 467 522 IPR036638 GO:0046983
Arst2g00056 659 Gene3D - 460 532 IPR036638 GO:0046983
Arst2g00056 659 PANTHER TRANSCRIPTION FACTOR TT8 11 657 - -
Arst2g00056 659 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 16 199 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00056 Arst-Chr2 398679 403193 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00056 15 656 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 39.329 1.75e-127 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00056 - - adu:107472380 1326.61