Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00024 ATGGATCGTGGGGACCAAATGGCGTTGTCTGGTTCTGCATCTTATTATATGCAGAGAGGAATGCCTGGTTCTGGAACACAGCAACCTGACTTGCACAATTCGCCTAGTATGCGTCCATTGTCGAATCCTAACCTCTCATTTCAACCAAGTATTGGGGGTAGTACCATTGGATCCACCATGCCATTGGAATCTTCGGGGATGTCATCTCAATGTGTCAATGTTGGTGCCCCTTCTGGAGCTCCTCCCGGAGAACCGGTCAAAAGGAAGAGAGGTAGGCCTAGGAAGTATGGGCCGGATGGAACTGTTTCACTGGCATTGACTCCAACGCCAGCTACTCATCCGGGAACCATGACACAACAAGGCCAGAAACGGGGTAGAGGTCGCCCTCCAGGGTCAGGGAAGAAACAGCAGCTGGCCTCTCTTGGTGAATTGATGTCTGGTACAGCTGGGATGGGTTTCACTCCTCATATCATCACCGTTGCGGTTGGAGAAGACATCGCAACCAAAGTTATGGCGTTTTCTCAGCAAGGGCCTAGAGCAATTTGTATTATGGCAGCCACTGGTGCTGTCTCTACCGTGACACTTCGACAACCTTCAACTTCCGGCGGCACTGTAACATATGAGGGCCGTTTTGAGATATTGTGCCTATCAGGCTCTTACTTACTTACCGATAGTGATGGATCTCGCAATCGATCTGGGGGACTAAGTGTTTCCCTTGCTAGTCCTGATGGCCGTGTTATCGGTGGAGGAGTTGGCGGAGTACTTGTTGCAGCATCTACAGTTCAGGTTGTAGTTGGGAGCTTTATTTGGGGCGGATCGAAGGCGAAGAAACAGAAAAAAGAAGGTTCCTCCGAAGGAGCAGAAGTTGCTATGGAGCCGGATCATCAGACGGTTCATAACATTTCTCCGAATCAAAATCTTACTCCAACCTCGTCTCTAAGTCCGTGGCCTAGTTCGCGACCAATGGATATGCGCCATTCGCATATTGACATCGATTTAATGCGTGGGTGA 1011 0.4985 MDRGDQMALSGSASYYMQRGMPGSGTQQPDLHNSPSMRPLSNPNLSFQPSIGGSTIGSTMPLESSGMSSQCVNVGAPSGAPPGEPVKRKRGRPRKYGPDGTVSLALTPTPATHPGTMTQQGQKRGRGRPPGSGKKQQLASLGELMSGTAGMGFTPHIITVAVGEDIATKVMAFSQQGPRAICIMAATGAVSTVTLRQPSTSGGTVTYEGRFEILCLSGSYLLTDSDGSRNRSGGLSVSLASPDGRVIGGGVGGVLVAASTVQVVVGSFIWGGSKAKKQKKEGSSEGAEVAMEPDHQTVHNISPNQNLTPTSSLSPWPSSRPMDMRHSHIDIDLMRG 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00024 336 FunFam AT-hook motif nuclear-localized protein 1-like 155 286 - -
Arst2g00024 336 MobiDBLite consensus disorder prediction 11 75 - -
Arst2g00024 336 MobiDBLite consensus disorder prediction 275 324 - -
Arst2g00024 336 Pfam Plants and Prokaryotes Conserved (PCC) domain 155 268 IPR005175 -
Arst2g00024 336 CDD DUF296 154 268 IPR005175 -
Arst2g00024 336 Gene3D - 155 287 - -
Arst2g00024 336 MobiDBLite consensus disorder prediction 1 137 - -
Arst2g00024 336 SMART AT_hook_2 123 135 IPR017956 GO:0003677
Arst2g00024 336 SMART AT_hook_2 87 99 IPR017956 GO:0003677
Arst2g00024 336 MobiDBLite consensus disorder prediction 105 125 - -
Arst2g00024 336 ProSiteProfiles PPC domain profile profile. 149 289 IPR005175 -
Arst2g00024 336 MobiDBLite consensus disorder prediction 297 318 - -
Arst2g00024 336 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 54 311 IPR039605 GO:0003680
Arst2g00024 336 SUPERFAMILY AF0104/ALDC/Ptd012-like 153 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00024 Arst-Chr2 288456 292991 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00024 1 336 AT-hook Motif Nuclear Localized (AHL) Family AT3G61310 51.532 2.42e-90 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00024 - - gmx:100799791 499.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst2g00024 2 288456 292991 Arst2g00024 2 288456 292991 ECH
Arst4g03156 4 108148966 108152133 Arst2g00024 2 288456 292991 PCT