Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00012 ATGGATAATACTATTGTTCTCTTCACACTAAGCTTTCTTCTTGTATCTTCAAATGGCATCATGTCACAGCAGAATTATTCAGGAAACTCAGTACTAAATTGCAACAACAACGACGCAGAGGGTCCTTCTTCAGATTTCCTATACACCTGCAATGGATTCCAAAAATCTTGCTTAGCCTTTCTCATATTCAAATCCCAAACTCCTCACAACACCATTGCCACAATCTCCAACCTCACTTCCTCAAACCCAGAGGACCTTGCAAGGTTCAACAACGCCACTCATTCCACACTGTTCCGAACCGGCAAAGAAGTCATTGTCCCTCTCAATTGTTCTTGTCCAACCACAGAACATGATGATGATTATGATGAGTACTATCAAGCCCAAACCACATACGTTCTGCCAAAAGATCCAACATATTTTACAGCAGCAAATGATACCTTTCAGGGATTAACCACGTGCGATTCTCTCCAGCGTTACAATCCTTATGGGGTTCTTGATTTGCATCCTGGCATGGTGTTGCACGTGCCCCTCAGATGCGCTTGTCCGACGGCGCGTCAAGCCGTCAGCGGCACCAAGTATTTGCTGACCTACTCGGTTAATTGGGGTGATAACATCTCTAATATCGCAACACGGTTCCATGTCAACGCAAGTAGTATGGTTGATGCCAATGGTTTCTCCTCAGAAAATGAAATGCTCTATCCATTCACAACTGTCCTGATTCCTTTAACAAGTGAACCCAACAGCACAATAACCAAAGTTCAAAATGGTCAACCACCTTCTCCAACTACTCTTTACACTGTAAGAAATGATAAGACAAAGACAAAAAGAAAAAGAATCATAGTTGCTCTTACTTCCTCTTCGAGCTTCTTGTTTTTTCTGTTTGTCGTTGTATCCCTAGTGTTTGTGCGTAGAAAGAGATTAGAAATTTTCTTCAGGGGAGATAGAAAAGGCAGAACAAAGCAAGTGTTTGCAGAACAAATACGTGAAGGGTTAGCAAGCATTGAGCTTCTTTCCAAAGTGTACAAGTTTGATGAAATTAAAGAAGCAACTGAGAATTTCAGTGCAAGCAACAGAATCAAAGGCTCTGTCTACCGTGGGGTATTTGGTAAGGAGAAGGAAATCATGGCGATCAAGAAGATGAATTTGGGTGCCTCTAAGGAAGTGAATTTGTTAGGAAGGATCAATCACTTCAACCTGATAAAGCTGGAAGGTTACTGTGAAAAAGATGGATCCTTCTATCTTGTTTTTGAGTACATGGAAAATGGTTGTTTGAGAGAATGGCTTGGGAGAAGAAACAGAACCACAGAACACCAATGTTGGAGAAAGAGGATTCGGATTGCTGTGGATATTGCAAATGGACTTGAGTATCTTCATAACTTCACAGATCCTTGCTATGTTCACAAGGCCATAAACACTGACAATATATTGCTAAATAAAGATCTAAGGGCCAAGATAGCGAATTTCACTCTGGCTAAAGAATCAGATAGAGAAGTAACAAGCTCTTGTTCTTATTACACATCACATGTTGTGGGAACCAGAGGTTATATGGCTCCAGAGTATCTTGATTCAGGGAGAGTCACATCGAAGATGGATGTGTATGCGTTCGGAGTGGTGCTGTTGGAATTGATCACTGGCAAAGATTCTATTATTGTGCAGGATGATGGAAGTGAGACGATGCTTTCATCAATCATATTGAACCTCATTGACAAAGATGATGCAGAAGAGAAACTCAGTTTGTTCATTGATCCTAGTCTCGTGGGAAACAGTGAGAAGGTCTATGCAATTCAGCTAGTTAAGCTAAGCCTAGCATGCTTGGTTGAAGAACCTTCAAGGAGACCAAACATGGCCGAAGTGGTCTCGAGTTTGCTTAGAATATATACAGAAATTGAGATAAGAACGTCACCCTGCCGCATCAATGACAGTGGAAGCACGGAGAGGTGA 1941 0.4158 MDNTIVLFTLSFLLVSSNGIMSQQNYSGNSVLNCNNNDAEGPSSDFLYTCNGFQKSCLAFLIFKSQTPHNTIATISNLTSSNPEDLARFNNATHSTLFRTGKEVIVPLNCSCPTTEHDDDYDEYYQAQTTYVLPKDPTYFTAANDTFQGLTTCDSLQRYNPYGVLDLHPGMVLHVPLRCACPTARQAVSGTKYLLTYSVNWGDNISNIATRFHVNASSMVDANGFSSENEMLYPFTTVLIPLTSEPNSTITKVQNGQPPSPTTLYTVRNDKTKTKRKRIIVALTSSSSFLFFLFVVVSLVFVRRKRLEIFFRGDRKGRTKQVFAEQIREGLASIELLSKVYKFDEIKEATENFSASNRIKGSVYRGVFGKEKEIMAIKKMNLGASKEVNLLGRINHFNLIKLEGYCEKDGSFYLVFEYMENGCLREWLGRRNRTTEHQCWRKRIRIAVDIANGLEYLHNFTDPCYVHKAINTDNILLNKDLRAKIANFTLAKESDREVTSSCSYYTSHVVGTRGYMAPEYLDSGRVTSKMDVYAFGVVLLELITGKDSIIVQDDGSETMLSSIILNLIDKDDAEEKLSLFIDPSLVGNSEKVYAIQLVKLSLACLVEEPSRRPNMAEVVSSLLRIYTEIEIRTSPCRINDSGSTER 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00012 646 Pfam Protein kinase domain 361 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst2g00012 646 FunFam PTI1-like tyrosine-protein kinase 3 419 634 - -
Arst2g00012 646 Gene3D Phosphorylase Kinase; domain 1 328 418 - -
Arst2g00012 646 Gene3D Transferase(Phosphotransferase) domain 1 419 638 - -
Arst2g00012 646 SMART LysM_2 196 241 IPR018392 -
Arst2g00012 646 SUPERFAMILY Protein kinase-like (PK-like) 333 622 IPR011009 -
Arst2g00012 646 SUPERFAMILY LysM domain 195 241 IPR036779 -
Arst2g00012 646 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 5 630 - -
Arst2g00012 646 Pfam LysM domain 197 241 IPR018392 -
Arst2g00012 646 ProSiteProfiles LysM domain profile. 195 240 IPR018392 -
Arst2g00012 646 ProSiteProfiles Protein kinase domain profile. 353 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst2g00012 646 Gene3D LysM domain 195 253 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00012 Arst-Chr2 131229 133169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00012 10 625 Receptor kinase-like Gene Family AT2G23770 37.757 1.30e-119 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Arst2g00012 Pkinase 7.8e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00012 - - aip:107641252 761.525