Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst26235483g00001 ATGCTTGATATTGATAAGAGTATTGAGGTGGTGTGGGGTATTGGTGTTGGAATTGTGGTAGTTCTAAGTGTGGTTCATAAGGTTATTCATGAGGCACATAAGGTTGATGGTATGGCGAGTATAGGTTTGTCTCATATGGAGGTATTTGGTGATAGTGTGATGTGGCTTATGAGTAAGGTTGACCATAATGTTGAGGGTTTGATTGGTATTGGTATGCATCCAGAGGTGGATAGTAGCTATAAGGATGTAGAGGAGGATGGAAGACTCAAAGATCAACTTCGTAATGATAGTTTTTCTTCTTTAGAGAGACAACTAATAGAAACAAAGGAGGCAATTGAACGTCAGCGCAAATTATTCAAGAAAAAACAATCTGATAAGGGAGATACAACTGATGCAGAGGCTGGATTACCAGAAGATGTTCTCATTCATGATGAAATTTATAAATCTCGACTGGCTAGCATCAAACGGGAGGAAGAAGTTATTTTGCGTGAGAGGGATCGCTATGAACTAGAGAAGGGAAGGTTGATTCGTGAAATGAAACGTATAAGGGATGAAGATGGTTCACGGTTCAACAACTTTCAGATTCTACACCATCGATATGCCCTTCTAAACCTTCTCGGAAAGGGAGGGTTCAGTGAGGTTTACAAGGCTTTTGATTTGGTAGAGCATAGATACGTTGCCTGCAAGCTTCATGGTTTAAATCCTCAATGGAGTGAAGAGAAGAAGCAGAGTTACATGCGGCATGCAATTCGGGAGTATAATATTCACAAGTCCCTTGTGCATCATCACATTGTTCGTTTATGGGACATATTTGAGATTGATCAAAATACGTTCTGCACTGTTCTGGAATATTGTAGTGGGAAAGATCTTGATGCTGTCCTTAAAGCAACACCTATATTGCCAGAGAAGGAGGCTAGAGTCATTCTGGTTCAGATTTTTCAAGGCCTTATATACATGAATAAAAGAACACAGAAGATTATCCATTATGATTTAAAGCCAGGAAATGTTCTGTTTGATGAGCTTGGTATTGCAAAAGTGACTGATTTTGGTCTCAGCAAGATAGTGGAGGATGATGTTGGATCCCAGGGTATGGAACTTACATCCCAGGGAGCTGGAACATATTGGTATTTGCCTCCTGAATGCTTTGAGCTCAGCAAGACGCCTTATATTTCATCGAAGGTTGATGTCTGGTCTGCTGGCATTTTGTTCTATCAAATGCTCTTCGGTAGACGTCCTTTCGGGCATGACCAAACTCAAGAGAGAATACTTCGTGAAGACACAATTATTAAGGCGCGCAAGGTTGACTTTCCTACTAGGCCTGCTGTTTCTAATGAGGCAAAGGATTTCATTCGTCGGTGTCTCACGTATAACCAGATTGAGAGACCAGATGTATTAACAATTGCTCAAGATCCATATCTCACATACTCAAAGAAGTAA 1437 0.4057 MLDIDKSIEVVWGIGVGIVVVLSVVHKVIHEAHKVDGMASIGLSHMEVFGDSVMWLMSKVDHNVEGLIGIGMHPEVDSSYKDVEEDGRLKDQLRNDSFSSLERQLIETKEAIERQRKLFKKKQSDKGDTTDAEAGLPEDVLIHDEIYKSRLASIKREEEVILRERDRYELEKGRLIREMKRIRDEDGSRFNNFQILHHRYALLNLLGKGGFSEVYKAFDLVEHRYVACKLHGLNPQWSEEKKQSYMRHAIREYNIHKSLVHHHIVRLWDIFEIDQNTFCTVLEYCSGKDLDAVLKATPILPEKEARVILVQIFQGLIYMNKRTQKIIHYDLKPGNVLFDELGIAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPYISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVDFPTRPAVSNEAKDFIRRCLTYNQIERPDVLTIAQDPYLTYSKK 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst26235483g00001 478 PANTHER MIXED LINEAGE PROTEIN KINASE 96 477 - -
Arst26235483g00001 478 Coils Coil 151 185 - -
Arst26235483g00001 478 Gene3D Transferase(Phosphotransferase) domain 1 191 478 - -
Arst26235483g00001 478 CDD STKc_TLK 199 472 - -
Arst26235483g00001 478 ProSiteProfiles Protein kinase domain profile. 200 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst26235483g00001 478 Pfam Protein kinase domain 201 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst26235483g00001 478 SMART serkin_6 200 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst26235483g00001 478 ProSitePatterns Protein kinases ATP-binding region signature. 206 229 IPR017441 GO:0005524
Arst26235483g00001 478 ProSitePatterns Serine/Threonine protein kinases active-site signature. 326 338 IPR008271 GO:0004672|GO:0006468
Arst26235483g00001 478 SUPERFAMILY Protein kinase-like (PK-like) 192 474 IPR011009 -
Arst26235483g00001 478 Coils Coil 98 118 - -
Arst26235483g00001 478 FunFam Serine/threonine-protein kinase TOUSLED 191 478 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst26235483g00001 183 478 MAP Kinase Kinase Kinase AT3G13530 27.667 1.45e-27 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TLK Arst26235483g00001 Pkinase 3.9e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst26235483g00001 K08864 - gmx:100789927 719.153