Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst26235216g00045 ATGATAGATGCGATACATGAGTGCCTTCTTAAGAAAAAAGTGAGTTGCATCTGGATTGATGGAGGTACACCTGCTGCATCAAGGCAACAATTGGTGGAAAAGGATTATATCAAGGCAGCTGTACTATCCATTAAAGCGGGAGGAGTTGGATTAACTTTAACTGCTGCAAGCACAGTTATCTTTACAGAACAATCCTGGACTCCAGGTGACCTAATTCAGGCCAAAGATCGTGCATATAGAATTGGTCAGGTGTTAGATGGCCATGAGAACACCTTAGCTGTGTCAAATAATCATCCATTGAGTAGCCCTGCAAAGCATACTACTATTGGGCATAGGCCTTCAAAGCAGAGAACTCTTGACCAGTTTGTCAGAAGATGTGATAATGTGGATAGGTCGGAAGTCGGAACATCAGCCTGA 417 0.4317 MIDAIHECLLKKKVSCIWIDGGTPAASRQQLVEKDYIKAAVLSIKAGGVGLTLTAASTVIFTEQSWTPGDLIQAKDRAYRIGQVLDGHENTLAVSNNHPLSSPAKHTTIGHRPSKQRTLDQFVRRCDNVDRSEVGTSA 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst26235216g00045 138 SMART helicmild6 3 82 IPR001650 -
Arst26235216g00045 138 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 130 IPR001650 -
Arst26235216g00045 138 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 96 IPR027417 -
Arst26235216g00045 138 CDD SF2_C_SNF 1 83 - -
Arst26235216g00045 138 Gene3D - 1 96 IPR027417 -
Arst26235216g00045 138 Pfam Helicase conserved C-terminal domain 7 82 IPR001650 -
Arst26235216g00045 138 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 1 84 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst26235216g00045 1 83 RAD5 or RAD16-like Gene Family AT1G02670 36.782 1.10e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst26235216g00045 K14440 - adu:107462208 256.914