Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Arst26235216g00045 | ATGATAGATGCGATACATGAGTGCCTTCTTAAGAAAAAAGTGAGTTGCATCTGGATTGATGGAGGTACACCTGCTGCATCAAGGCAACAATTGGTGGAAAAGGATTATATCAAGGCAGCTGTACTATCCATTAAAGCGGGAGGAGTTGGATTAACTTTAACTGCTGCAAGCACAGTTATCTTTACAGAACAATCCTGGACTCCAGGTGACCTAATTCAGGCCAAAGATCGTGCATATAGAATTGGTCAGGTGTTAGATGGCCATGAGAACACCTTAGCTGTGTCAAATAATCATCCATTGAGTAGCCCTGCAAAGCATACTACTATTGGGCATAGGCCTTCAAAGCAGAGAACTCTTGACCAGTTTGTCAGAAGATGTGATAATGTGGATAGGTCGGAAGTCGGAACATCAGCCTGA | 417 | 0.4317 | MIDAIHECLLKKKVSCIWIDGGTPAASRQQLVEKDYIKAAVLSIKAGGVGLTLTAASTVIFTEQSWTPGDLIQAKDRAYRIGQVLDGHENTLAVSNNHPLSSPAKHTTIGHRPSKQRTLDQFVRRCDNVDRSEVGTSA | 138 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Arst26235216g00045 | 138 | SMART | helicmild6 | 3 | 82 | IPR001650 | - | |
Arst26235216g00045 | 138 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 1 | 130 | IPR001650 | - | |
Arst26235216g00045 | 138 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1 | 96 | IPR027417 | - | |
Arst26235216g00045 | 138 | CDD | SF2_C_SNF | 1 | 83 | - | - | |
Arst26235216g00045 | 138 | Gene3D | - | 1 | 96 | IPR027417 | - | |
Arst26235216g00045 | 138 | Pfam | Helicase conserved C-terminal domain | 7 | 82 | IPR001650 | - | |
Arst26235216g00045 | 138 | PANTHER | DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER | 1 | 84 | - | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Arst26235216g00045 | 1 | 83 | RAD5 or RAD16-like Gene Family | AT1G02670 | 36.782 | 1.10e-10 | 56.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Arst26235216g00045 | K14440 | - | adu:107462208 | 256.914 |