Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst26235216g00040 ATGTACTATAAGAAAGTCAAGTTAAGTTGCAAGTTTCTTATATTTGCGCACCATCAGCCAATGATAGATGCGATACATGAGTGCCTTCTTAAGAAAAAAGTGGGTTGCATCTGGATTGATGGAGGTACACCCGCTGCATCAAGGCAACAATTGGTTACAGATTTCCAGGAAAAGGATTATATCAAGGCAGCTGTACTATCCATTAAAGCGGGAGGAGTTGGATTAACTTTAACTGCTGCAAGCACAGTTATCTTTACAGAACAATCCTGGACTCCAGGTGACCTAATTCAGGCCAAAGATCGTGCATATAGAATTGGTCAGGTGTTAGATGGCCATGAGAACACCTTAGCTGTGTCAAATAATCATCCATTGAGTAGCCCTGCAAAGCATACTACTATTGGGCATAGGCCTTCAAAGCAGAGAACTCTTGACCAGTTTGTCAGAAGATGTGATAATGTGGATAGGTCGGAAGTCGGAACATCAGCCTGA 489 0.4233 MYYKKVKLSCKFLIFAHHQPMIDAIHECLLKKKVGCIWIDGGTPAASRQQLVTDFQEKDYIKAAVLSIKAGGVGLTLTAASTVIFTEQSWTPGDLIQAKDRAYRIGQVLDGHENTLAVSNNHPLSSPAKHTTIGHRPSKQRTLDQFVRRCDNVDRSEVGTSA 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst26235216g00040 162 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 120 IPR027417 -
Arst26235216g00040 162 CDD SF2_C_SNF 11 107 - -
Arst26235216g00040 162 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 9 108 - -
Arst26235216g00040 162 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 154 IPR001650 -
Arst26235216g00040 162 SMART helicmild6 23 106 IPR001650 -
Arst26235216g00040 162 Gene3D - 3 120 IPR027417 -
Arst26235216g00040 162 Pfam Helicase conserved C-terminal domain 10 106 IPR001650 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst26235216g00040 9 107 RAD5 or RAD16-like Gene Family AT1G02670 35.354 5.95e-15 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst26235216g00040 K14440 - adu:107462208 302.367