Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst26235216g00038 ATGTACTATAAGAAAGTCAAGTTAAGTTGCAAGTTTCTTATATTTGCGCACCATCAGCCAATGATAGATGCGATACATGAGTGCCTTCTTAAGAAAAAAGTGAGTTGCATCTGGATTGATGGAGGTACACCTGCTGCATCAAGGCAACAATTGGTGGAAAAGGATTATATCAAGGCAGCTGTACTATCCATTAAAGCGGGAGGAGTTGGATTAACTTTAACTGCTGCAAGCACAGTTATCTTTACAGAACAATCCTGGACTCCAGGTGACCTAATTCAGGCCAAAGATCGTGCATATAGAATTGGTCAGGTGTTAGATGGCCATGAGAACACCTTAGCTGTGTCAAATAATCATCCATTGAGTAGCCCTGCAAAGCATACTACTATTGGGCATAGGCCTTCAAAGCAGAGAACTCTTGACCAGTTTGTCAGAAGATGTGATAATGTGGATAGGTCGGAAGTCGGAACATCAGCCTGA 477 0.4214 MYYKKVKLSCKFLIFAHHQPMIDAIHECLLKKKVSCIWIDGGTPAASRQQLVEKDYIKAAVLSIKAGGVGLTLTAASTVIFTEQSWTPGDLIQAKDRAYRIGQVLDGHENTLAVSNNHPLSSPAKHTTIGHRPSKQRTLDQFVRRCDNVDRSEVGTSA 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst26235216g00038 158 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 116 IPR027417 -
Arst26235216g00038 158 Pfam Helicase conserved C-terminal domain 10 102 IPR001650 -
Arst26235216g00038 158 Gene3D - 3 116 IPR027417 -
Arst26235216g00038 158 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 9 104 - -
Arst26235216g00038 158 CDD SF2_C_SNF 11 103 - -
Arst26235216g00038 158 SMART helicmild6 23 102 IPR001650 -
Arst26235216g00038 158 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 150 IPR001650 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst26235216g00038 9 103 RAD5 or RAD16-like Gene Family AT1G02670 35.354 1.35e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst26235216g00038 K14440 - adu:107462208 285.804