Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst26235216g00034 ATGATAGATGCGATACATGAGTGCCTTCTTAAGAAAAAAGTGGGTTGCATCTGGATTGATGGAGGTACACCCGCTGCATCAAGGCAACAATTGGTTACAGATTTCCAGGAAAAGGATTATATCAAGGCAGCTGTACTATCCATTAAAGCGGGAGGAGTTGGATTAACTTTAACTGCTGCAAGCACAGTTATCTTTACAGAACAATCCTGGACTCCAGGTGACCTAATTCAGGCCAAAGATCGTGCATATAGAATTGGTCAGGTGTTAGATGGCCATGAGAACACCTTAGCTGTGTCAAATAATCATCCATTGAGTAGCCCTGCAAAGCATACTACTATTGGGCATAGGCCTTCAAAGCAGAGAACTCTTGACCAGTTTGTCAGAAGATGTGATAATGTGGATAGGTCGGAAGTCGGAACATCAGCCTGA 429 0.4336 MIDAIHECLLKKKVGCIWIDGGTPAASRQQLVTDFQEKDYIKAAVLSIKAGGVGLTLTAASTVIFTEQSWTPGDLIQAKDRAYRIGQVLDGHENTLAVSNNHPLSSPAKHTTIGHRPSKQRTLDQFVRRCDNVDRSEVGTSA 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst26235216g00034 142 Pfam Helicase conserved C-terminal domain 7 86 IPR001650 -
Arst26235216g00034 142 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 1 88 - -
Arst26235216g00034 142 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 100 IPR027417 -
Arst26235216g00034 142 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 134 IPR001650 -
Arst26235216g00034 142 SMART helicmild6 3 86 IPR001650 -
Arst26235216g00034 142 CDD SF2_C_SNF 1 87 - -
Arst26235216g00034 142 Gene3D - 1 100 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst26235216g00034 1 87 RAD5 or RAD16-like Gene Family AT1G02670 36.782 5.18e-13 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst26235216g00034 K14440 - adu:107462208 273.478