Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst26235216g00015 ATGGCTCTGGCCACCTGCCTCACCTCTATCCTCCTCCAGGATGACCACGATCACCACCTCCGGTACTCCCACCCTGACCACCATCACCTCTACCATAGTGGCCCCGTAACCACCTCCACCACCTCCCTGACCTCCCGTCACCACCGTTGTACCCTCCTCCACCACCACCACTTCCCTGACCCCGTCGTCACCTCCATCATCTCCGTCATCACCACCTTCGTCCTCACCGCTACCCTCATCCTCTCCGCCTCTGCCTCCACGTCGGCCTCTACCTCACCACCACCTCTAGCTCCTCTACGGCCGCGACCCCTCCCCCCTCGCCGTCCAACCATTCCCAACCCTTCCCACCAAACCCCATTTCCGATTCCCGTCCTCAAAAAAGAATCAAAAGACCCTGTGGTTCAGTTTCTGGAAGGAGAACTTCTCATAGTGTGTTTGTATTCCAATCCAGGTGGACGCTTTGCCTCAAGGGAAAAAATGAGCCTTCTAAAGAACTGCCGAAGTTTTCTGTCAAACTTTTTCTTCATTCCAGTGGCCATGTTGCAGCGAAATTCCAATATGACCAGGTTATGGATGTTCCCGCTTTCTTCCTTGTCCGAAGCAGAGAAGGTTCTAGGAGAAATATCTAATTATAAAGTTCAGGCAGGTTGCAAGTTTCTTATATTTGCGCACCATCAGCCAATGATAGATGCGATACATGAGTGCCTTCTTAAGAAAAAAGTGGGTTGCATTTGGATTGATGGAGGTACACCCGCTGCATCAGGGCAACAATTGGTTACAGATTTCCAGGAAAAGGATTATATCAAGGCAGCTGTACTATCCATTAAAGCGGGAGGAGTTGGATTAACTTTAACTGCTGCAAGCACAGTTATCTTTACAGAACAATCCTGGACTCCAGGTGACCTAATTCAGGCCAAAGATCGTGCATATAGAATTGGTCAGGGATGTGGTGCAATTCAAACCGGATAA 969 0.5005 MALATCLTSILLQDDHDHHLRYSHPDHHHLYHSGPVTTSTTSLTSRHHRCTLLHHHHFPDPVVTSIISVITTFVLTATLILSASASTSASTSPPPLAPLRPRPLPPRRPTIPNPSHQTPFPIPVLKKESKDPVVQFLEGELLIVCLYSNPGGRFASREKMSLLKNCRSFLSNFFFIPVAMLQRNSNMTRLWMFPLSSLSEAEKVLGEISNYKVQAGCKFLIFAHHQPMIDAIHECLLKKKVGCIWIDGGTPAASGQQLVTDFQEKDYIKAAVLSIKAGGVGLTLTAASTVIFTEQSWTPGDLIQAKDRAYRIGQGCGAIQTG 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst26235216g00015 322 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 212 314 - -
Arst26235216g00015 322 SMART helicmild6 230 313 IPR001650 -
Arst26235216g00015 322 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 101 315 IPR027417 -
Arst26235216g00015 322 Pfam Helicase conserved C-terminal domain 212 313 IPR001650 -
Arst26235216g00015 322 CDD SF2_C_SNF 203 314 - -
Arst26235216g00015 322 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 200 322 IPR001650 -
Arst26235216g00015 322 Gene3D - 156 316 IPR027417 -
Arst26235216g00015 322 MobiDBLite consensus disorder prediction 94 119 - -
Arst26235216g00015 322 MobiDBLite consensus disorder prediction 86 121 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst26235216g00015 217 314 RAD5 or RAD16-like Gene Family AT1G02670 34.694 2.03e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst26235216g00015 K14440 - adu:107482564 362.073