Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst26235082g00107 ATGTATCATCATCAAGGGAAGAACATGCACTCTTCTTCAAGAATGCCAATCCCCTCTGAGAGGCACATGTTCCTTCAAACAGGAAACGGGTCTGGTGATTCTGGACTTGTTCTCTCAACTGATGCTAAGCCACGATTGAAATGGACGCCGGATCTTCATGCCAGGTTCATAGAAGCAGTGAACCAGTTAGGTGGAGCTGACAAAGCAACTCCAAAAACAGTAATGAAACTCATGGGGATTCCAGGTCTTACTTTATATCATCTGAAGAGCCATCTGCAGAAGTACAGATTGAGCAAGAATTTGCATGGACCAAATAACACTGTAACACACAAAATCACAGCAACAAATGTGGGGGCAACAACAAGTGAAAGATCACTTTCAGAACCCAGTGGAACTCATATGAACAAGTTAAGCCTTGTCCCACAGACTAACAACAGAGATTTACATATAAGTGAGGCACTGCAGATGCAAATTGAAGTGCAGCGAAGGCTAAATGAACAACTTGAGGTACAAAGACACTTGCAGCTTCGGATAGAGGCACAAGGAAAATACCTGCAGTCTGTGCTAGAGAAAGCTCAAGAGACACTTGGTAGACAAAATTTGGGAATGGTAGGACTTGAAGCTGCTAAAGTTCAACTATCAGAGCTGGTGTCCAAGGTCTCCTCCCAGTGCTTGAACTCGGCATTTTCAGAGCTGAAGGAACTACAAGGATTTTGCCCCAAGCAACCACAAACCAACCAGCCAAATGATTGCTCAATAGATAGTTGCCTCACATCTTGTGAAGGGTCACAGAAGGAGCAAGAGATACAGAATGGTGGGATAGGTTTAAGGCACTTAAATGGCCATGGCCATGCATTCATGGAAAGAAAGGGAGGCACAGAAGCTCCTAAATGGAGTAATGAAGTGAAAAACAACACCTTTCTAGCTCCATTAGGCAAGAATTCAGAAAGAAGTAGCTATGGTGCAGAGAGAAGCAGTGGAAACTTGTCTATGAGCATTGGACTTGAAAGGGAAACTGAGAATGGAAGCAGCATGTACACTGAGAGTCACACTCACACAGATGGTGAGTTCTGGCACAGAAACAGCAATAGGACAGAACCAAAGAATGAAGCAATGGATGGAGGAAGAGGTTCCCATGATTATAGGTTGCCTCCTCCATACTTTTCAGCAGCAAGATTGGACTTAAACTCACATGGGGATAACAATGAAGCTGCAACAACAACAACAAGCTGTAAACAACTGGACTTGAACAGATTCAGTTGGAGCTGA 1269 0.4381 MYHHQGKNMHSSSRMPIPSERHMFLQTGNGSGDSGLVLSTDAKPRLKWTPDLHARFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGPNNTVTHKITATNVGATTSERSLSEPSGTHMNKLSLVPQTNNRDLHISEALQMQIEVQRRLNEQLEVQRHLQLRIEAQGKYLQSVLEKAQETLGRQNLGMVGLEAAKVQLSELVSKVSSQCLNSAFSELKELQGFCPKQPQTNQPNDCSIDSCLTSCEGSQKEQEIQNGGIGLRHLNGHGHAFMERKGGTEAPKWSNEVKNNTFLAPLGKNSERSSYGAERSSGNLSMSIGLERETENGSSMYTESHTHTDGEFWHRNSNRTEPKNEAMDGGRGSHDYRLPPPYFSAARLDLNSHGDNNEAATTTTSCKQLDLNRFSWS 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst26235082g00107 422 MobiDBLite consensus disorder prediction 345 380 - -
Arst26235082g00107 422 Coils Coil 151 171 - -
Arst26235082g00107 422 NCBIfam myb-like DNA-binding domain, SHAQKYF class 43 98 IPR006447 GO:0003677
Arst26235082g00107 422 SUPERFAMILY Homeodomain-like 42 98 IPR009057 -
Arst26235082g00107 422 MobiDBLite consensus disorder prediction 352 377 - -
Arst26235082g00107 422 FunFam Myb family transcription factor 42 100 - -
Arst26235082g00107 422 Pfam MYB-CC type transfactor, LHEQLE motif 149 195 IPR025756 -
Arst26235082g00107 422 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 40 100 IPR017930 -
Arst26235082g00107 422 Gene3D - 42 100 - -
Arst26235082g00107 422 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 6 323 IPR044848 GO:0003700
Arst26235082g00107 422 Pfam Myb-like DNA-binding domain 45 96 IPR001005 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst26235082g00107 75 421 G2-like Transcription Factor Family AT3G04030 49.577 1.50e-89 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Arst26235082g00107 Myb_DNA-binding 3.7e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst26235082g00107 - - gmx:100810396 612.453