Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst26235082g00104 ATGGGGAGCCAGAGAATAATAGGAGGAGGACTTGGTTTATCTGAGGCAGGGCCTTCAACTCACCACCATCACCATGTCCCTTCTTATGGTGTTCTTCATGGAATTAATACTGCTAATCCATCAACCTTAATTAATGAAGGACATGCTTTTAACTTTGGAGAGTTGGAAGAGGCAATTGTGCTGCAAGGAGTAAAGGCAAGAAATGATGAAGGCAAAGCACCTTTATTCACAACAGCACCCAGACCTGCAGCTACACTAGAAATGTTCCCTTCATGGCCAATCAGATTTCACCAAACCTCAAGGGGAGGTTCAAAATCAGGAGGAGAAAGCACTGATTCAGCACTTTCAACAAAAACTGAGCCACCCTTCGAAGCAGAATCTCCAATGAGTAAAAAGGCAACAACACCTTCTTTAGATCATCAGCACCAGCTTCAACATGATCATCATGATGCCTCAAGAATAGTAGGCCCTTCTTCATCACCACAGAATCAATCACAAGCCAAATCACCTCATGAAAAGAGGAAGGGAGCTGGTTCCACATCAGAGAAACCACTTGATGCAAAGACATTGAGACGTTTGGCTCAAAACAGAGAGGCAGCAAGAAAAAGCCGTCTAAGGAAAAAGGCTTATGTGCAGCAATTAGAGTCAAGTAGATTAAAGCTTACACAACTTGAACAAGACCTTCAAAGGGCTCGTTCTCAGGGACTATTCATGGATTGTGGTGGTGTTGGAGGCAATCTAAGCTCCGGAGGTGCGATGTTTGACCTGGAATACGGAAGGTGGTTGGAGGAAGAGCAGCGGCTGATGGGGGAGCTCCGGAACGGGGTGCAGGCGGCGGTGTCGGAGGGGGAAATGAGAGGGATCGTGGATGGATATTTGTCCCATTACGATGAGCTGTTCAGGCTGAAGAGTGTGGCAGCGAAATCAGATGTTTTCCATCTCATCAATGGCATGTGGACCTCCCAAGCTGAACGCTGCTTCCTCTGGATCGGTGGTTTCAAGCCCTCGGACCTCATCACGATGTTGATACAACAGTTGGAGCCACTGGCGGAGCAACAGATAATGGGAATGTATGGCCTGCGCCATTCCTCACAGCAAGCGGAGGACGCTCTTTCTCAAGGCCTTGACCAGCTCCAGCAGTCTCTCGTCGACACCATCGCCGGCGGCCCCATTGTCGACGGCGTCCAACAGATGGTTGTTGCCATGGGCAAGCTTGCCAATCTTGAAGGCTTTGTTCGCCAGGACGTTGATGAGCGATGA 1260 0.4881 MGSQRIIGGGLGLSEAGPSTHHHHHVPSYGVLHGINTANPSTLINEGHAFNFGELEEAIVLQGVKARNDEGKAPLFTTAPRPAATLEMFPSWPIRFHQTSRGGSKSGGESTDSALSTKTEPPFEAESPMSKKATTPSLDHQHQLQHDHHDASRIVGPSSSPQNQSQAKSPHEKRKGAGSTSEKPLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQDLQRARSQGLFMDCGGVGGNLSSGGAMFDLEYGRWLEEEQRLMGELRNGVQAAVSEGEMRGIVDGYLSHYDELFRLKSVAAKSDVFHLINGMWTSQAERCFLWIGGFKPSDLITMLIQQLEPLAEQQIMGMYGLRHSSQQAEDALSQGLDQLQQSLVDTIAGGPIVDGVQQMVVAMGKLANLEGFVRQDVDER 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst26235082g00104 419 PANTHER TRANSCRIPTION FACTOR TGA9 135 414 - -
Arst26235082g00104 419 MobiDBLite consensus disorder prediction 1 27 - -
Arst26235082g00104 419 MobiDBLite consensus disorder prediction 88 190 - -
Arst26235082g00104 419 Gene3D - 187 236 - -
Arst26235082g00104 419 MobiDBLite consensus disorder prediction 97 120 - -
Arst26235082g00104 419 FunFam BZIP family transcription factor 187 236 - -
Arst26235082g00104 419 SMART brlzneu 184 249 IPR004827 GO:0003700|GO:0006355
Arst26235082g00104 419 Coils Coil 207 234 - -
Arst26235082g00104 419 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 191 206 IPR004827 GO:0003700|GO:0006355
Arst26235082g00104 419 Pfam Seed dormancy control 269 343 IPR025422 GO:0006351|GO:0043565
Arst26235082g00104 419 SUPERFAMILY Leucine zipper domain 188 231 IPR046347 GO:0003700|GO:0006355
Arst26235082g00104 419 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 186 230 IPR004827 GO:0003700|GO:0006355
Arst26235082g00104 419 Pfam bZIP transcription factor 187 229 IPR004827 GO:0003700|GO:0006355
Arst26235082g00104 419 ProSiteProfiles DOG1 domain profile. 251 419 IPR025422 GO:0006351|GO:0043565
Arst26235082g00104 419 MobiDBLite consensus disorder prediction 168 190 - -
Arst26235082g00104 419 CDD bZIP_HBP1b-like 188 238 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst26235082g00104 142 414 bZIP Transcription Factor Family AT1G08320 63.309 2.35e-125 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Arst26235082g00104 DOG1 1.8e-27 No_clan