Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst26235082g00015 ATGGATGCTCACCAAGAAACACTGATATTCAACAATGATTATGAGGTGCATGATTTCACTGAGGACCCCAACTTTGATCAGCTCATCAATTTAATTAGAGGGGATAATAATAATGAAGATGATGCTGCTGTGTTCTTTAACTATGGTTCAGACATTATCACCAATGATTGCTTCCTTGATGATAATCAGAATCAGAATCATTTACTTCTTCCATATGATCAGATTCATCAGAGCCATAACAACAATAGTAGCAATGAAGTGATGATGAATAATGTGTGTGGTGATGATCCTAGCCCTACTAACCTTATTAGCTCCTTCTCTTGCTTTGATGAAGGGGTGGTTAATAGAGAAAATGAAGGAGAGTATTCTTCTGCAACCACAACTGCAACTGATGAGGCTAATCTTAGTGGTAAACCAAGGCTGAAAGCTGATAGGTCCAAGACTCTCATCTCTGAGAGGAGGAGGAGAAGCAGAATGAAGGAGAAGCTTTATGCACTCCGCTCTTTGGTCCCTAACATAACAAAGATGGATAAGGCATCGATCATTGGAGATGCATTATCGTACGTGCATGAGCTTCAAGCACAAGCTAAGAAGCTAAAGGCAGAGGTTGCAGGACTTGAAGCATCTCTGTTTGTGTCAGAAAATTACAAAGCATCCTTTGATGACAATTACATAAAAACTGTTCAAGTCACACACAATAGCCACCCGATCAACAAGAAGATAGTGCAGATAGAGATGGTTCAAGTGGAAGAAAGAGGGTATTATGTGAAGATAGTGTGCAACAAAGGAGGAGGAGTTGCTGCATCACTCTACAGGGCTCTCGAGTCTCTTGTGGGTTTCAGTGTTCGGAATTCAAACTTTGAAACTGTTTGTGACACTATACTACTTACATTTACATTGAATGTTAAAGGCTTTGAACCAGAAGTTAACCTGCCAAACTTGAAGCTATGGGTGACAGGCGCTCTTCTCAACCAAGGCTTTGAATTCATGGCAAATTTTCATTATTGA 1008 0.4008 MDAHQETLIFNNDYEVHDFTEDPNFDQLINLIRGDNNNEDDAAVFFNYGSDIITNDCFLDDNQNQNHLLLPYDQIHQSHNNNSSNEVMMNNVCGDDPSPTNLISSFSCFDEGVVNRENEGEYSSATTTATDEANLSGKPRLKADRSKTLISERRRRSRMKEKLYALRSLVPNITKMDKASIIGDALSYVHELQAQAKKLKAEVAGLEASLFVSENYKASFDDNYIKTVQVTHNSHPINKKIVQIEMVQVEERGYYVKIVCNKGGGVAASLYRALESLVGFSVRNSNFETVCDTILLTFTLNVKGFEPEVNLPNLKLWVTGALLNQGFEFMANFHY 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst26235082g00015 335 Gene3D - 141 215 IPR036638 GO:0046983
Arst26235082g00015 335 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 145 212 IPR036638 GO:0046983
Arst26235082g00015 335 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 143 192 IPR011598 GO:0046983
Arst26235082g00015 335 Pfam Helix-loop-helix DNA-binding domain 150 193 IPR011598 GO:0046983
Arst26235082g00015 335 Coils Coil 189 209 - -
Arst26235082g00015 335 FunFam Basic helix-loop-helix (BHLH) DNA-binding superfamily protein 139 209 - -
Arst26235082g00015 335 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 11 325 - -
Arst26235082g00015 335 SMART finulus 149 198 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst26235082g00015 12 327 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G28160 50.000 1.15e-94 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst26235082g00015 HLH 1.5e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst26235082g00015 K26214 - gmx:100805451 358.992