Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst26235080g00149 ATGCACGTAATGCATAGCATGAAAGCTGAGCTAAAAGGAGCATCCTCTATCTCCTTCCAAAACCACAGCCTCTTCAACACAGCACCACACAGTTCACTCACCGGAGCACTCAAAGGATGTCTCGGAAGCCTCGACGGCGCGTGCATCGAGAAGCTTCTTCTCCACTGCGCAAGCGCCTTGGAGAGCAACGATGTAACCTTGGCACAACAAGTGATGTGGGTCCTCAACAACGTTGCTTCACCAACCGGTGACACAAATCAAAGGCTCACATCATGGTTCCTCAGGGCACTGATCTCTAGGGCTTCAAGGATTTGCCCTACAGCCTTGAGTTTCAAGGGGAGTAGCAACAACATTCAGAGGAGGTTGATGACGGTTACCGAGCTAGCAGGATACGTGGATCTCATTCCATGGCACAGGTTTGGGTTTTGTGCTTCAAATAATGAGATTTTCAAAGCAATTTTAGGGTTCCAAAGGGTACATATCTTAGACTTTAGCATCACTCATTGTATGCAATGGCCTACTTTCATTGATGCATTGGCCAAAAGCCCTGAAGGTCCTCCTTCACTTAGAATCACTGTCCCATCTTTTAGGCCACCGGTGCCTCCATTGGTGAATGTATCAACTCATGAGGTTGGCCTTCGGTTGGCGAATTTCGCAAAGTTTAAGGATGTCCCTTTTGAATTCAATGTCATAGGGAACAATTTAGGTCCCTTATTAGCACCTAATAATTCTGAATTAAGCAATGAATCAACTAGTTTTCATGTTGAGTCATTGCTGAGTCTGTTGAATCCTAGTGTGCTAAACCTTAGGGATGATGAGGCTTTGGTCATAAATTGTCAAAATTGGCTTCGTTATTTGTCTGATGATAGAAAGGGAAACCAACGTTGCCTTTCTCTCCGTGATGCTTTTTTGAGTTTAGTTAAAGGTCTTAACCCTCAGATTGTGGTTTTGGTGGATGAGGATTGTGATCTTAGTTCACCAAGCCTCACATCAAGAATTGCAACATGTTTCAACCATCTCTGGATACCCTTTGATGCATTGGAGACTTTCTTGCCTAAGGACAGTTGCCAGAGGACAGAGTTCGAATCCGACATTGGACAGAAGATTGAGAACATCATAGGATATGAAGGGCATCATAGGATAGAGAGGTTGGAGTCAGGGATGCAGATGTGCCAGAGAATGAAGAATGCTGGTTACTTGAGCCTCCCATTTTGTGATGAAACGGTTATGGAAGTTAAGGGTTTGCTTGATGAGCATGCTAGTGGATGGGGGATGAAGAGGGAAGAAGGAATGTTGGTTCTCACATGGAAAGGAAACAGCTGTGTCTATGCCACTGCTTGGGTCCCCAGTGAAACCAGGGATCCTATTGGTTTCGATGCAACTATGGCATAA 1392 0.4497 MHVMHSMKAELKGASSISFQNHSLFNTAPHSSLTGALKGCLGSLDGACIEKLLLHCASALESNDVTLAQQVMWVLNNVASPTGDTNQRLTSWFLRALISRASRICPTALSFKGSSNNIQRRLMTVTELAGYVDLIPWHRFGFCASNNEIFKAILGFQRVHILDFSITHCMQWPTFIDALAKSPEGPPSLRITVPSFRPPVPPLVNVSTHEVGLRLANFAKFKDVPFEFNVIGNNLGPLLAPNNSELSNESTSFHVESLLSLLNPSVLNLRDDEALVINCQNWLRYLSDDRKGNQRCLSLRDAFLSLVKGLNPQIVVLVDEDCDLSSPSLTSRIATCFNHLWIPFDALETFLPKDSCQRTEFESDIGQKIENIIGYEGHHRIERLESGMQMCQRMKNAGYLSLPFCDETVMEVKGLLDEHASGWGMKREEGMLVLTWKGNSCVYATAWVPSETRDPIGFDATMA 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst26235080g00149 463 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 49 443 IPR005202 -
Arst26235080g00149 463 Pfam GRAS domain family 50 447 IPR005202 -
Arst26235080g00149 463 ProSiteProfiles GRAS family profile. 40 448 IPR005202 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst26235080g00149 37 449 GRAS Transcription Factor Family AT3G49950 44.656 2.34e-116 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Arst26235080g00149 GRAS 5.4e-84 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst26235080g00149 - - gmx:100805056 764.607