Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst26235080g00146 ATGTTTTCAGGAATGAGCCTCCAATCACTCCTAAACCTCAACCCCTCCCTCCTCTCCTTCCTCACCGACCACCCTCCACAACCACAACTACCAAACCACCTTACTCTTCACCCCACTCTTGAACCCTTCAACTTCATCCCAAAACGCCCCCGCCTCACCTACTCTTCGTGTTCATCATCGTCATCGTCTCCGCCGTCCTCCCTCCGAGCAAAACCCCTTCCTCAGAAGAGCAACTTTGCTCGCCAGAGAAGGCAGAAGCTCAGCGAGAAGACTCGCTGCCTCCAGAAGTTGATGCCATGGGACAAGAAGATGGATCAGGCCACACTTTTCGAACAAGCCTACAGCTATGTTAAGTTCTTGCAGGTTCAGGTCTCCGTTCTTCAATCCATGCCCTACCACGCACCACCGTCACCCTCCTTCAACAATGGCGGCGGCTGTGTGTTCGGGTTCGGCGACTTGGAGAGGCTGAGCAGGAACCAGTTGCTGCAGGTGCTGGTGAACTCTCCGGTGGCGCAGACGGTGATGTCGTCGAAGGGTTTGTGCGTCTTCTCAGTGGAGCAGTTAGGGTTGCTGACGAAACTCTCGGAGCGGAGGCTTCTCCTTCAGAATATGAACGCCAACATGAACATGGTGTCTGATTCAAAACCTTTCTTCAACTAA 660 0.5348 MFSGMSLQSLLNLNPSLLSFLTDHPPQPQLPNHLTLHPTLEPFNFIPKRPRLTYSSCSSSSSSPPSSLRAKPLPQKSNFARQRRQKLSEKTRCLQKLMPWDKKMDQATLFEQAYSYVKFLQVQVSVLQSMPYHAPPSPSFNNGGGCVFGFGDLERLSRNQLLQVLVNSPVAQTVMSSKGLCVFSVEQLGLLTKLSERRLLLQNMNANMNMVSDSKPFFN 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst26235080g00146 219 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 77 194 IPR045843 GO:0003700|GO:0006355
Arst26235080g00146 219 MobiDBLite consensus disorder prediction 55 81 - -
Arst26235080g00146 219 Gene3D - 74 133 IPR036638 GO:0046983
Arst26235080g00146 219 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 71 120 IPR011598 GO:0046983
Arst26235080g00146 219 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 78 133 IPR036638 GO:0046983
Arst26235080g00146 219 SMART finulus 77 126 IPR011598 GO:0046983
Arst26235080g00146 219 MobiDBLite consensus disorder prediction 55 88 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst26235080g00146 83 195 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G22100 46.018 3.46e-27 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst26235080g00146 - - aprc:113855910 182.185