Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst26235080g00143 ATGAAGTTTACAAGACCTGTTTATGCTGTTTTTTTTGTCTTTCTTCTTTGTGCCTTGGCCAAAATCGGCTTTGAAGGGAAACTGTGGAAACCCCAAGAGTTTTATGCAGATCATGGTGTTGTAATTAAGGAAGAGCAGGAGTGGATACATTGCAGGAAGGAATTGATAGAGAGGAACAATGATATTAAGGACTATGACTTGGAAATAAAAACAAACTTATTAGATTGCATTACAAGGACACATCCTCCAACTCATGATTCAGAAGAGAAGGAGCATGATCATGTGTCAGTGTCACAGTTTTATTCCGAAGACAATCGCGGTAGATACTTGCTTGACAAGTTACCTCAGAGTGAGAGGAAACTACCAAGACCTGTTCCTGTTCCATCACCCAAAAAACTGCGTGTCAAGAAGAAGTTTGCCAACTCGCTTCCGCCTCAAGGGATAACACTAAGTGCCATTTCTCCTTCTCCAAATTCTCCACCTATAGACTTTTATGTGCTATTTCCACCACCACCAGATTCACCTCCCCCTCCTCCTCCTCCTCAAGTTGATGAGGAGGATAATAGCAAACGAAAGATACCAATTATCATTGGTTCGGTTGTATCAGGAATAATAATCATAGTAGGCATGCTCTTATGCTATCGTGAGATCAGGAAAAGCAGAAAAGTCTACAAAGATGACAGGCCTTTAACTGTATTAGGCTCAAGTGATGTGTCTGGTTCAAAGAAGTCTATTGCTTTGGGAAATTCTAATACCAATGAAAATGGTATAATCTATGCAAAGAACCCTTCTATTGTTGGGAATGTTATCACTAGTCCGGAAGATAACAATGCCTCATTGGGTGAGGCCTCATCATCAGAAAGCAAGGAACAAGTTCCATTAGGTGCTGCTCCAGAAGGATTAGCCCCTGAGCCGGCAGGGCCACCACCCCCACCACCTCCACCCCCTGCTGCTGCGCCTCGCCCCCCACCGGCTCCAAAAGCACCTGTTAGGCCTCCACCTGCCCCTCCTGTTAAAATCCTTTCACGGGCACGTCTTAGTAATGTAGAAGAGGATTCTGCAGATGCTCCGAAAGCGAAACTAAAGCCATTTTTCTGGGATAAGGTTGCTGCATCTCCTGATCAAGCAATGGTCTGGCATGAGATCAGAGCAGGGTCATTCCAGTTCAATGAACAGAAAATCGAGTCTTTATTTGGCTGCAACAACCCCAATAGAAAAGAGTCACCATCACAAGAACCTTCATTACAGTTAATTCAGATTATTGATCCTAAGAAAGCACAGAATTTATCAATTCTTTTACGTGCTTTGAATGTGACTACAGAAGAAGTTGTTGATGCCCTTAGAGAAGGTAGCGAGATTCCTGTTGAGCTGATCCAAACATTAATAAAGATGGCGCCAACAACAGATGAGGAACTGAAGCTGAGGTTATTTGATGGAAACATTGCTCAACTTGGCCCTGCAGAGCGGTTTCTCAAGGTCTTAGTTGACATTCCACTCGCTTTCCGGCGTCTCGAGTCTCTACAACTCATGCTCACTCTTCCAGAAGAGGTCTCAAGCATCAAGGAGTGCTTTTCAACATTAGAGGTTTCATGTGATAAACTAAGAAAAAGTAGGCTCTTCCTTAAACTACTAGAAGCAGTTCTCAAGACAGGAAACAGATTGAATGATGGAACATATCGTGGCGGCGCTCAAGCCTTCAAGCTTGACACACTTTTGAAGCTTTCGGATGTAAAAGGAACCGATGGAAAGACAACACTTCTACACTTTGTGGTTCAGGAGATCATACGTTCTGAGGGAGTAAGAGCTTTGAGAACAGAGAGAGCGAGGCAGAGCAATTCTAGTGTCGGAACAGAGGATTCTGTTGATGATTCCATTGGCCAAGAATCAGAAGAACACTACCGAAGACTTGGCCTTAAAGTAGTTTCAGGCCTAAGCAGTGAACTTGAAGATGTTAAAAGGGCGGCGATTATAGACGGCGATGCTCTAACGGCTGCAGTGTGGAAACTTGATCGGTTACTCAGCAAAAGTGAGGAGTTATTGAACAATGATTTGAAGAGCATAGATGAAGACAGCAACTTCAAGCGTTCCCTTGAAAATTTTGTGGACAAATCAAAAGCTCAAGTGTCATGGCTGTCTGAGGAAGAGAAGAGGATCATGGCTGAAGTGAAGGCTACAGCAGATTACTTCCATGGACAAGCAGGGAAAGATGAAGGTTTGAGATTGTTTGTAATTGTTCGTGATTTCTTGGTAATGTTGGACACAGTATGCAAAGAGGTGCAGTTAACAACACAGAAGCCAATGAAGATCTCTCATAAGAAAGAGGCTTCAAATTTGTCGTCGCCACCAGTATCTCCGAATACTCAGCAGCAGTCTCCTTCTGATCTGCATAGAAGACTGTTTCCGGCCATAGCAGCGCGCAGGATCCATTGCTCTAGTTCAGATGAGGATGAGGACGAGAAAGAGGATGATAATTAG 2475 0.436 MKFTRPVYAVFFVFLLCALAKIGFEGKLWKPQEFYADHGVVIKEEQEWIHCRKELIERNNDIKDYDLEIKTNLLDCITRTHPPTHDSEEKEHDHVSVSQFYSEDNRGRYLLDKLPQSERKLPRPVPVPSPKKLRVKKKFANSLPPQGITLSAISPSPNSPPIDFYVLFPPPPDSPPPPPPPQVDEEDNSKRKIPIIIGSVVSGIIIIVGMLLCYREIRKSRKVYKDDRPLTVLGSSDVSGSKKSIALGNSNTNENGIIYAKNPSIVGNVITSPEDNNASLGEASSSESKEQVPLGAAPEGLAPEPAGPPPPPPPPPAAAPRPPPAPKAPVRPPPAPPVKILSRARLSNVEEDSADAPKAKLKPFFWDKVAASPDQAMVWHEIRAGSFQFNEQKIESLFGCNNPNRKESPSQEPSLQLIQIIDPKKAQNLSILLRALNVTTEEVVDALREGSEIPVELIQTLIKMAPTTDEELKLRLFDGNIAQLGPAERFLKVLVDIPLAFRRLESLQLMLTLPEEVSSIKECFSTLEVSCDKLRKSRLFLKLLEAVLKTGNRLNDGTYRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGVRALRTERARQSNSSVGTEDSVDDSIGQESEEHYRRLGLKVVSGLSSELEDVKRAAIIDGDALTAAVWKLDRLLSKSEELLNNDLKSIDEDSNFKRSLENFVDKSKAQVSWLSEEEKRIMAEVKATADYFHGQAGKDEGLRLFVIVRDFLVMLDTVCKEVQLTTQKPMKISHKKEASNLSSPPVSPNTQQQSPSDLHRRLFPAIAARRIHCSSSDEDEDEKEDDN 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst26235080g00143 824 MobiDBLite consensus disorder prediction 270 291 - -
Arst26235080g00143 824 MobiDBLite consensus disorder prediction 163 187 - -
Arst26235080g00143 824 MobiDBLite consensus disorder prediction 270 338 - -
Arst26235080g00143 824 MobiDBLite consensus disorder prediction 606 626 - -
Arst26235080g00143 824 MobiDBLite consensus disorder prediction 163 183 - -
Arst26235080g00143 824 MobiDBLite consensus disorder prediction 767 796 - -
Arst26235080g00143 824 MobiDBLite consensus disorder prediction 81 99 - -
Arst26235080g00143 824 MobiDBLite consensus disorder prediction 234 256 - -
Arst26235080g00143 824 ProSiteProfiles Formin homology-2 (FH2) domain profile. 351 778 IPR015425 -
Arst26235080g00143 824 MobiDBLite consensus disorder prediction 231 256 - -
Arst26235080g00143 824 Gene3D Formin, FH2 domain 356 780 IPR042201 -
Arst26235080g00143 824 SUPERFAMILY Formin homology 2 domain (FH2 domain) 310 765 - -
Arst26235080g00143 824 SMART it6_source 351 767 IPR015425 -
Arst26235080g00143 824 MobiDBLite consensus disorder prediction 606 622 - -
Arst26235080g00143 824 PANTHER FORMIN-RELATED 13 787 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Arst26235080g00143 824 MobiDBLite consensus disorder prediction 302 338 - -
Arst26235080g00143 824 Pfam Formin Homology 2 Domain 354 752 IPR015425 -
Arst26235080g00143 824 MobiDBLite consensus disorder prediction 773 795 - -
Arst26235080g00143 824 MobiDBLite consensus disorder prediction 80 99 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst26235080g00143 173 808 FH2 protein (formin) Gene Family AT5G54650 47.989 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst26235080g00143 - - ahf:112705264 1412.13