Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst26235080g00114 ATGGATATGTTTCAAGCCAACATGATGGAAGGTGGTCAATTGCACCACCACGGCCTCGAGATGGGTCAGAACACGCCGGAGAGCGACGTCCCTAGAATCCGAGAGGACGAGTTCGACAGCGCCACCAAGTCCGGCAGCGAGAACCAAGAAGGTGGCGCCTCCGGCGAGGACCAAGACCCCCGCCCTAACAAGAAGAAGCGTTACCACCGCCACACCCAGCACCAGATCCAGGAAATGGAAGCATTCTTTAAGGAGTGTCCGCACCCAGATGACAAGCAAAGGAAGGAACTGAGCCGTGAGTTAGGGTTAGAGCCATTGCAAGTGAAGTTTTGGTTCCAGAACAAGCGCACTCAAATGAAGACGCAACATGAGAGGCACGAGAACACGCAGCTAAGGACAGAGAACGAGAAGCTGAGAGCGGATAACATGAGGTATAGGGAGGCTCTTAGCAATGCCTCTTGCCCCAACTGTGGTGGACCAACCGCCATTGGAGAAATGTCTTTTGATGAGCATCACTTGAGGCTTGAAAATGCCAGGCTAAGGGAAGAGATTGATCGGATTTCTGCCATTGCTGCAAAGTACGTGGGGAAGCCAGTGGTGAACTACCCACTCCTTTCATCATCCTCAGTTCCAGCACGTCCGCTAGAACTCGGCATTGGTGGTTTCGGTGGGCAAGCGGGCATGGGTGGTGGCGACATGTACGGAGGAGGTGGAGCCGGAGATCTTCTGAGGCCAATAAGTGGGCCCACTGAAGCAGACAAGCCAATGATAATAGAGCTGGCCGTAGCGGCCATGGAGGAGCTGATTGGGATGGCACAGATGGGTGAGCCTCTTTGGTTGACCACACTTGATGGTGCCACCACTGTGCTTAACGAGGATGAATATGTCAGATCTTTCCCCCGTGGAATTGGACCCAAACCTAATGGATTCAAATGTGAGGCTTCACGAGAAACCGCTGTTGTCATCATGAACCATGTTAACCTTGTTGAGATTCTCATGGATGTGAACCAATGGTCGACAGTTTTCTCTGGAATAGTTTCAAGAGCGGTGACTCTAGAAGTTCTATCAACAGGGGTAGCAGGAAACTATAACGGTGCCTTGCAAGTGATGACGGCGGAGTTACAAGTGCCTTCGCCGCTGGTGCCAACAAGAGAGAGCTATTTCGTAAGGTATTGTAAGCAGCACGCGGACGGCACGTGGGCAGTGGTGGACGTGTCGTTGGACAATTTGCGGCCTAGTCCTTCGGCCAGGTGCAGGAGAAGGCCTTCTGGTTGCTTGATTCAAGAAATGCCCAACGGCTACTCCAAGGTCATATGGGTTGAGCACGTTGAAGTTGATGACAGAGGCGTTCATAGTCTCTATAAGCAGCTTGTTAGCTCTGGTCACGCCTTCGGTGCCAAACGCTGGATTGCAACCTTGGATCGCCAGTGTGAAAGGCTCGCTAGTGCCATGGCAACTAACATTCCCACCGTTGATGTTGGAGTGATAACAAATCAAGAAGGGAGGAAGAGCATGCTGAAACTGGCGGAGAGAATGGTGATAAGCTTTTGTGCTGGAGTGAGTGCTTCAACGGCGCACACGTGGACAACGCTTTCTGGAACGGGTGCGGATGACGTCAGAGTCATGACACGTAAGAGTGTGGATGACCCTGGAAGGCCACCTGGCATTGTTCTCAGTGCTGCTACTTCTTTCTGGCTCCCAGTACCTCCTAAAAGGGTCTTTGAATTCCTCCGTGACGAGAATTCCAGAAGCGAGTGGGACATCCTTTCCAATGGTGGAGTTGTTCAAGAAATGGCACATATTGCTAATGGAAGAGATACTGGAAATTGTGTCTCTCTCCTTCGAGTCAACAGTGCGAATTCAAGCCAGAGTAACATGTTGATATTGCAAGAGAGTTGCACGGATTCAACTGGGTCATTTGTGATCTATGCCCCAGTGGACATTGTTGCCATGAATGTGGTTCTGAATGGAGGAGATCCTGACTATGTGGCGCTTCTTCCTTCTGGCTTCGCTATTCTTCCGGACGGGACAACGCCGGACGGAGGCAGCGAAGCCGGTGGACATGGTGGTTCTCTCTTAACTGTTGCGTTTCAAATACTGGTTGATTCCGTTCCAACCGCCAAGCTGTCTCTTGGTTCTGTTGCCACTGTTAACAACCTTATTGCTTGCACTGTTGAGAGAATTAAGGCTTCTTTATCTGGAGAAGCTCCTTCATAA 2217 0.5106 MDMFQANMMEGGQLHHHGLEMGQNTPESDVPRIREDEFDSATKSGSENQEGGASGEDQDPRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSSSSVPARPLELGIGGFGGQAGMGGGDMYGGGGAGDLLRPISGPTEADKPMIIELAVAAMEELIGMAQMGEPLWLTTLDGATTVLNEDEYVRSFPRGIGPKPNGFKCEASRETAVVIMNHVNLVEILMDVNQWSTVFSGIVSRAVTLEVLSTGVAGNYNGALQVMTAELQVPSPLVPTRESYFVRYCKQHADGTWAVVDVSLDNLRPSPSARCRRRPSGCLIQEMPNGYSKVIWVEHVEVDDRGVHSLYKQLVSSGHAFGAKRWIATLDRQCERLASAMATNIPTVDVGVITNQEGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFEFLRDENSRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESCTDSTGSFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTTPDGGSEAGGHGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSGEAPS 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst26235080g00114 738 Gene3D - 52 139 - -
Arst26235080g00114 738 SUPERFAMILY Bet v1-like 498 729 - -
Arst26235080g00114 738 FunFam Homeobox-leucine zipper protein HDG1 52 138 - -
Arst26235080g00114 738 MobiDBLite consensus disorder prediction 29 43 - -
Arst26235080g00114 738 FunFam Homeobox-leucine zipper protein GLABRA 2 259 478 - -
Arst26235080g00114 738 MobiDBLite consensus disorder prediction 16 73 - -
Arst26235080g00114 738 Coils Coil 128 148 - -
Arst26235080g00114 738 ProSiteProfiles START domain profile. 250 482 IPR002913 GO:0008289
Arst26235080g00114 738 ProSitePatterns 'Homeobox' domain signature. 97 120 IPR017970 GO:0000981|GO:0006355
Arst26235080g00114 738 ProSiteProfiles 'Homeobox' domain profile. 62 122 IPR001356 GO:0003677
Arst26235080g00114 738 SMART HOX_1 63 126 IPR001356 GO:0003677
Arst26235080g00114 738 SUPERFAMILY Bet v1-like 250 481 - -
Arst26235080g00114 738 CDD START_ArGLABRA2_like 254 478 - -
Arst26235080g00114 738 SMART START_1 259 479 IPR002913 GO:0008289
Arst26235080g00114 738 Gene3D - 304 476 IPR023393 -
Arst26235080g00114 738 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 63 732 IPR042160 -
Arst26235080g00114 738 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 63 732 IPR042160 -
Arst26235080g00114 738 CDD homeodomain 65 123 IPR001356 GO:0003677
Arst26235080g00114 738 SUPERFAMILY Homeodomain-like 54 122 IPR009057 -
Arst26235080g00114 738 Pfam Homeodomain 65 120 IPR001356 GO:0003677
Arst26235080g00114 738 Pfam START domain 260 479 IPR002913 GO:0008289
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst26235080g00114 3 735 Homeobox Transcription Factor Family AT1G05230 79.161 0.0 1174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Arst26235080g00114 START 2.8e-57 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst26235080g00114 K09338 - gmx:100809556 1316.21