Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst26235080g00111 ATGATGTTAATGCTAACAAAAGCATCCTTCGTTCGACTAAACTTGAAATTATGTTGCATGATACAAATTGCAGCGGGTTTCTTGGAACCGTGGAAGTTGATGGAGAATGAAGTGGTTGCTGCAATTGGTCCACAATCATCTGGAATAGCTCATGTCATCTCTCATGTGGCTAATGAACTCCATGTGCCTCTTCTTTCATTCGCGACAGACCCTGCTTTAGTGTCACTCCAGTATCCATATTTCATCCGCACCACGCCAGATGACTATTTCCAGATGTATGCAATTGCAGACTTGGTTGATCACTATAGGTGGAGGGAGGTAATAGCTATCTTTGTAGATGATGACAATGGAAGAAATGGAATTTCAGTGTTGGGCGATGCGCTTGCTAAGAAACGTGCCAAGATATCTTACAAGGCCGCATTCCCTCCTGGAGCCCCCATGAGTAATATCAGTGACTTGTTGAATCAGGTGAACCTGATGGAATCACGTGTTTATGTGCTGCATGTTAATCCTGATTCTGGCTTGTCAATTTTTGCACTTGCCAAGAAGATTGGGATGATGACTAGTGGCTATGTGTGGATTGCAACAGATTGGCTTCCTTCTGTGCTGGATTCTATGGAGCAGGTTAACACTGACACCCTTAATATACTACAAGGAGTTGTTGCTCTGCGGCATCACACGCCTGACACTGATCTTAAGAAGAGTTTCATCTCAAATCTGAAGAGCAGAAAGAACAATGAGACTGCAGGCTTCAATTCTTATGCATTCTATGCATATGATTCTGTTTGGTTAGCAGCGCGTGCTCTGGATACTTTTCTCAATGAAGGTGGAAACATATCTTTCTCCTCGGATCCTAAGTTGCAAGACACAAATTCAAGTATGTTGCATTTTTCAGCACTCCGTGTGTTTGATGGCGGCGATAAGTTTCTTCAGACAATTCTGAAAACAAACTTCACTGGTGTGAGTGGCCCAGTTCAGTTTGGTATGGATAAGAATTTGATTCATCCAGCTTATGATATCATGAATATCGGCGGGTTTGGAACTCGTAGGATTGGTTATTGGTCTAATTATTCTGGTCTCTCAGTTATAGCTCCTGAAATTTTGTATCTGAAACCACCTAACGCTTCGGCAAGCAACCAACACCTATATAGTGTTATATGGCCTGGAGAAACAACAGTTACACCAAGGGGATGGGTATTCCCAAACAATGGGAAACCATTGAGAATCGCAGTGCCTAATCGAGTAAGCTATTTGGAGTTTGTTGGTAAGGACAAGAACCCTCCTGGGGTAAAAGGCTATTGCATTGATGTCTTTGAAGCAGCCATAAAGTTGTTGCCTTATCCTGTTCCAACAGAATATATATTATATGGTCATGGTGATAGAAATCCCAGCTATGATGACCTTGCATATCAGGTTGCACAAAATAACTTTGATGCAGTTGTTGGAGATATTACAATTGTCACCAACAGGACAAGGATTGTGGATTTTACTCAGCCTTACATGGAATCAGGGCTGGTGGTTGTTGTTCCTGTTAAGGAAATCAAGTCAAGCCCTTGGTCCTTTCTAAAGCCATTCACCACTAAAATGTGGTTAGTTACTGGTGCATTCTTTCTCTTCGTGGGAGCCGTCGTGTGGATTCTTGAGCACCGGCACAATGAAGAATTCCGCGGTCCTCCAAGGAAACAAATTATAACAGTGTGTTGGTTTAGTTTCTCAACAATGTTTTTCTCACACAGAGAGAACACTGTGAGTGCACTCGGTCGATTGGTTCTACTCATATGGCTTTGGGTGGTTTTAATCATCAATTCAAGCTACACAGCTAGCTTAACATCCATCCTCACAGTGCAGCAACTTTCATCACAGATTGAAGGAATTGACAGCTTGATCTCAGGTACTCAACCAATTGGAATCCAAGAAGGATCTTTTGCGAAAAAGTATCTGACAGATGAACTCAACATAGCACCATCTAGGATAGTTACACTGAAAAATATGGAGGCATATGTTGATGCTCTTGAACGCGGACCAAGGAATGGAGGGGTTGTGGCCATTGTTGATGAGCTTCCTTATATTCAGCTCTTCATGTCCAATACCAACTGTAAGTTCAGAACAGTTGGACAGGAGTTCACTAAAAGTGGTTGGGGATTTGCATTCCAAAGGGATTCACCGCTTGCTGTTGATTTGTCAACTGCCATCCTTCAACTTTCGGAGAACGGGGAACTGCAAAAGATCCATGACAAATGGCTTTTGAAGCGAGACTGCACTGCGCAACTCAATGTTGAAGACTCAAATAAACTGTCTCTGAGTAGCTTCTGGGGCCTCTTTCTCATATGTGGCATTGCATGCTTCCTTTCTTTGGTTGTATTCTTTGTTAGAGTGTTCTGTCAATACACCAGATTTAGCCCTGAGCCTGAACAAGTTGATGTGGAAATTCAACCAAGGCCTCCTAGAAGGAACCTCAAAAGTACTAGTTTCAAGGACTTGATGGAATTTGTGGATACCAAAGAAAAAGAAATCAAAGAGAGACTTAGGAAAAGTAAAAGGAGAAGAAGCCAGAGTCTAGATGAGCAATCTAGTTCATCACCCTCCTAA 2589 0.4233 MMLMLTKASFVRLNLKLCCMIQIAAGFLEPWKLMENEVVAAIGPQSSGIAHVISHVANELHVPLLSFATDPALVSLQYPYFIRTTPDDYFQMYAIADLVDHYRWREVIAIFVDDDNGRNGISVLGDALAKKRAKISYKAAFPPGAPMSNISDLLNQVNLMESRVYVLHVNPDSGLSIFALAKKIGMMTSGYVWIATDWLPSVLDSMEQVNTDTLNILQGVVALRHHTPDTDLKKSFISNLKSRKNNETAGFNSYAFYAYDSVWLAARALDTFLNEGGNISFSSDPKLQDTNSSMLHFSALRVFDGGDKFLQTILKTNFTGVSGPVQFGMDKNLIHPAYDIMNIGGFGTRRIGYWSNYSGLSVIAPEILYLKPPNASASNQHLYSVIWPGETTVTPRGWVFPNNGKPLRIAVPNRVSYLEFVGKDKNPPGVKGYCIDVFEAAIKLLPYPVPTEYILYGHGDRNPSYDDLAYQVAQNNFDAVVGDITIVTNRTRIVDFTQPYMESGLVVVVPVKEIKSSPWSFLKPFTTKMWLVTGAFFLFVGAVVWILEHRHNEEFRGPPRKQIITVCWFSFSTMFFSHRENTVSALGRLVLLIWLWVVLIINSSYTASLTSILTVQQLSSQIEGIDSLISGTQPIGIQEGSFAKKYLTDELNIAPSRIVTLKNMEAYVDALERGPRNGGVVAIVDELPYIQLFMSNTNCKFRTVGQEFTKSGWGFAFQRDSPLAVDLSTAILQLSENGELQKIHDKWLLKRDCTAQLNVEDSNKLSLSSFWGLFLICGIACFLSLVVFFVRVFCQYTRFSPEPEQVDVEIQPRPPRRNLKSTSFKDLMEFVDTKEKEIKERLRKSKRRRSQSLDEQSSSSPS 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst26235080g00111 862 MobiDBLite consensus disorder prediction 841 862 - -
Arst26235080g00111 862 Gene3D - 519 642 - -
Arst26235080g00111 862 FunFam Glutamate receptor 402 518 - -
Arst26235080g00111 862 FunFam Glutamate receptor 518 648 - -
Arst26235080g00111 862 Gene3D - 643 751 - -
Arst26235080g00111 862 CDD GluR_Plant 405 748 - -
Arst26235080g00111 862 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 831 IPR015683 -
Arst26235080g00111 862 SMART GluR_14 408 750 IPR001320 GO:0015276|GO:0016020
Arst26235080g00111 862 FunFam Glutamate receptor 87 255 - -
Arst26235080g00111 862 PRINTS Metabotropic glutamate GPCR signature 72 91 IPR000337 GO:0004930|GO:0007186|GO:0016020
Arst26235080g00111 862 PRINTS Metabotropic glutamate GPCR signature 107 124 IPR000337 GO:0004930|GO:0007186|GO:0016020
Arst26235080g00111 862 PRINTS Metabotropic glutamate GPCR signature 91 107 IPR000337 GO:0004930|GO:0007186|GO:0016020
Arst26235080g00111 862 PRINTS Metabotropic glutamate GPCR signature 41 67 IPR000337 GO:0004930|GO:0007186|GO:0016020
Arst26235080g00111 862 Pfam Receptor family ligand binding region 33 343 IPR001828 -
Arst26235080g00111 862 SUPERFAMILY Periplasmic binding protein-like I 32 399 IPR028082 -
Arst26235080g00111 862 PIRSF IGluLR_plant 9 862 IPR017103 -
Arst26235080g00111 862 PIRSF IGluLR_plant 9 862 IPR017103 -
Arst26235080g00111 862 Gene3D - 402 518 - -
Arst26235080g00111 862 Pfam Ligand-gated ion channel 750 781 IPR001320 GO:0015276|GO:0016020
Arst26235080g00111 862 CDD PBP1_GABAb_receptor_plant 32 362 IPR044440 -
Arst26235080g00111 862 Gene3D - 32 335 - -
Arst26235080g00111 862 FunFam Glutamate receptor 644 752 - -
Arst26235080g00111 862 SUPERFAMILY Periplasmic binding protein-like II 382 749 - -
Arst26235080g00111 862 Pfam Bacterial extracellular solute-binding proteins, family 3 427 749 IPR001638 -
Arst26235080g00111 862 Gene3D - 87 360 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst26235080g00111 26 715 Ion Channels AT1G05200 69.320 0.0 1028
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst26235080g00111 K05387 - gmx:100799912 1280.39