Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst26235080g00059 ATGGACATGATGGGAACCGAACGTGTTTGTTATGTTTACTGCAACTTCTGCAACACCACTCTAGCGGTTAGTGTTCCATGTAGCAGTTTGCTGACCATAGTGACAGTTAGATGTGGGCATTGTGCCAATCTGCTATCAGTTAACATGGGAGCATCTCTTCAAGCATTGCCTCCTCAAGACCCTCACCATCATCAGAAGCAGCACCTGAGCTTCCAAGATCCAAGCAGCAAGGAACTGGGATCATCCTCGTCAAGATGCAACAAGTTATCAGCAGCATTTGATCCTGTAGACCATGATCCCCAACCTAGGATCCCTCCCATTCGTCCTCCGGAAAAGAGACAACGTGTTCCTTCTGCTTATAACCGGTTCATTAAGGAGGAAATCCAAAGAATTAAGGCTAGCAACCCAGACATAAGCCACAGGGAAGCTTTCAGCACAGCAGCCAAAAATTGGGCTCATTTCCCTCACATTCACTTTGGATTAAAGCTGGATGGAAACAAACAAGCAAAGTTGGACCAAGGGGAAGGGACTCAAAAGTCTAATGGATTCTACTGA 555 0.4613 MDMMGTERVCYVYCNFCNTTLAVSVPCSSLLTIVTVRCGHCANLLSVNMGASLQALPPQDPHHHQKQHLSFQDPSSKELGSSSSRCNKLSAAFDPVDHDPQPRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGNKQAKLDQGEGTQKSNGFY 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst26235080g00059 184 CDD HMG-box_SF 115 151 - -
Arst26235080g00059 184 SUPERFAMILY HMG-box 106 154 IPR036910 -
Arst26235080g00059 184 MobiDBLite consensus disorder prediction 72 89 - -
Arst26235080g00059 184 MobiDBLite consensus disorder prediction 56 116 - -
Arst26235080g00059 184 Pfam YABBY protein 6 161 IPR006780 GO:0007275
Arst26235080g00059 184 Gene3D High mobility group box domain 106 173 IPR036910 -
Arst26235080g00059 184 FunFam Axial regulator YABBY 106 176 - -
Arst26235080g00059 184 PANTHER PROTEIN YABBY 6-RELATED 6 170 IPR006780 GO:0007275
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst26235080g00059 4 184 C2C2-YABBY Transcription Factor Family AT1G08465 65.591 2.10e-79 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Arst26235080g00059 YABBY 6.9e-72 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst26235080g00059 K25796 - gmx:100785458 302.753