Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst26235080g00058 ATGGACATGATGGGAACCGAACGTGTTTGTTATGTTTACTGCAACTTCTGCAACACCACTCTAGCGGTTAGTGTTCCATGTAGCAGTTTGCTGACCATAGTGACAGTTAGATGTGGGCATTGTGCCAATCTGCTATCAGTTAACATGGGAGCATCTCTTCAAGCATTGCCTCCTCAAGACCCTCACCATCATCAGTCACAGAAGCAGCACCTGAGCTTCCAAGATCCAAGCAGCAAGGAACTGGGATCATCCTCGTCAAGATGCAACAAGTTATCAGCAGCATTTGATCCTGTAGACCATGATCCCCAACCTAGGATCCCTCCCATTCGTCCTCCGGAAAAGAGACAACGTGTTCCTTCTGCTTATAACCGGTTCATTAAGGAGGAAATCCAAAGAATTAAGGCTAGCAACCCAGACATAAGCCACAGGGAAGCTTTCAGCACAGCAGCCAAAAATTGGGCTCATTTCCCTCACATTCACTTTGGATTAAAGCTGGATGGAAACAAACAAGCAAAGTTGGACCAAGGGGAAGGGACTCAAAAGTCTAATGGATTCTACTGA 561 0.4617 MDMMGTERVCYVYCNFCNTTLAVSVPCSSLLTIVTVRCGHCANLLSVNMGASLQALPPQDPHHHQSQKQHLSFQDPSSKELGSSSSRCNKLSAAFDPVDHDPQPRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGNKQAKLDQGEGTQKSNGFY 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst26235080g00058 186 CDD HMG-box_SF 117 153 - -
Arst26235080g00058 186 Pfam YABBY protein 6 163 IPR006780 GO:0007275
Arst26235080g00058 186 MobiDBLite consensus disorder prediction 55 118 - -
Arst26235080g00058 186 SUPERFAMILY HMG-box 108 156 IPR036910 -
Arst26235080g00058 186 PANTHER PROTEIN YABBY 6-RELATED 6 172 IPR006780 GO:0007275
Arst26235080g00058 186 Gene3D High mobility group box domain 108 175 IPR036910 -
Arst26235080g00058 186 MobiDBLite consensus disorder prediction 70 91 - -
Arst26235080g00058 186 FunFam Axial regulator YABBY 108 178 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst26235080g00058 4 186 C2C2-YABBY Transcription Factor Family AT1G08465 64.894 5.15e-79 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Arst26235080g00058 YABBY 2e-72 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst26235080g00058 K25796 - gmx:100785458 303.138