Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst26235080g00054 ATGGATCATCTCTTGATCCGCAAGTTCCGCCACCGCTTACTTGCATGGCTTCACCGATCTCGTTCCGGTAGGGTGTTCTTTGTAAGGAGAATTCCGTACAAGGATGTTAAAAGGGCCACTGATGGTTTCCAGAGAGTCATTTATAGCAACTCTGAGGTTACTGCATATGCTGCCAGGTTTGGGGAGGGTGGTGGTGGTGTGTTTTTGGTCAAGGAAGTGAAAGATTTTGGTCAACAAAATGATGTTTTCTGCAGACAGATTCAATTCTTGGGGCGCTTGCATCATCGCCATCTTCTCTCCCTCAAAGGGTTTTCTGTGGGAAAACATAAGAGACTGCTCATATTTGATAACATAGAGAATGGAAGCTTAAAGGAGCATCTCAATGATCCCTTGAAGACTCCCTTAAATTGGAGGACGAGGTTGCAGATTGCTAATGAAGTTGTGGCAGCACTGGAATACTTGTTTCTTTTCAGTGATCCACCGGCATATCATGTCTCCATCAGCTCAAGCAATATTATGTTAGATGAGAACTTTGCAGCTAAACTATCAGATTTTAGCCTTCTTACTCCCAGTACAAACTCTGTCATGATGCCGAATTCAGGAGATAGCATGAAGCAGAAGAGTTGCAAGATCATATTCCAACTCGGAGTGCTGATACTGGAATTGGTCACCGGCCAATCTTCAGAGATGGAAGGTTCAGATTTAATCCCATGGATCCAACAATCCCGATTTTACAATTCCATAGATAAGATGATAGACCCTGATCTTGGAAACAATTATGACTGTACGGAGCTTAAAAATCTTCTAGCAGTGGCAAAATTATGTATCAAATCAAGGGACAAGGCTACATTTACAATCTCTCAATTATTTCGGTATCTGCAAAGGAAGATTGATATTTCCCATGACAAGGTACGATAG 918 0.4216 MDHLLIRKFRHRLLAWLHRSRSGRVFFVRRIPYKDVKRATDGFQRVIYSNSEVTAYAARFGEGGGGVFLVKEVKDFGQQNDVFCRQIQFLGRLHHRHLLSLKGFSVGKHKRLLIFDNIENGSLKEHLNDPLKTPLNWRTRLQIANEVVAALEYLFLFSDPPAYHVSISSSNIMLDENFAAKLSDFSLLTPSTNSVMMPNSGDSMKQKSCKIIFQLGVLILELVTGQSSEMEGSDLIPWIQQSRFYNSIDKMIDPDLGNNYDCTELKNLLAVAKLCIKSRDKATFTISQLFRYLQRKIDISHDKVR 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst26235080g00054 305 Gene3D Phosphorylase Kinase; domain 1 13 116 - -
Arst26235080g00054 305 PANTHER OS01G0253100 PROTEIN 28 299 - -
Arst26235080g00054 305 Pfam Protein tyrosine and serine/threonine kinase 69 191 IPR001245 GO:0004672|GO:0006468
Arst26235080g00054 305 FunFam Protein kinase superfamily protein 118 208 - -
Arst26235080g00054 305 FunFam Protein kinase superfamily protein 17 116 - -
Arst26235080g00054 305 Gene3D Transferase(Phosphotransferase) domain 1 118 304 - -
Arst26235080g00054 305 SUPERFAMILY Protein kinase-like (PK-like) 25 269 IPR011009 -
Arst26235080g00054 305 FunFam probable receptor-like protein kinase At1g49730 212 301 - -
Arst26235080g00054 305 SMART tyrkin_6 54 290 IPR020635 GO:0004713|GO:0006468
Arst26235080g00054 305 ProSiteProfiles Protein kinase domain profile. 11 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst26235080g00054 23 301 Receptor kinase-like Gene Family AT3G19300 36.964 3.78e-54 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Arst26235080g00054 PK_Tyr_Ser-Thr 5.2e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst26235080g00054 - - gmx:100791979 447.588