Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst26235080g00052 ATGGGTGTCTCAGGGAAATGGATTAGATCATTGATTGGTCTAAAGAAGTCTGAAAAGGCAGAGTCTTCTGAGAAGGACCGAAATAAGGTTGGCAAGTCTCGGCATCAAAGAAAGCATTCGATTGAATTTGATAATGGTAAACTTCAAAATGAGCTTGATGATGATGTGACTCTGCCTATCAGAGATGATAATGATCGTTCAAACTCCGATGTCCATTATTCACCTTCTACTTCTCAACAAGCTCTTGATACTGCACATAATCACCAAATAATGAGGGAAGAATGGGCTGCCATTCGCATTCAAACAGCATTTCGAGGATTCCTGGCCAGAAGAGCACTAAGAGCTTTGAAAGGATTGGTAAGGCTTCAGGCCCTTGTAAGAGGCCATGCAGTAAGAAAACAAGCTGCAATAACATTGCGTTGCATGCAAGCTTTGGTGAGGGTTCAGGCTCGTGTTCGGGCAAGGCGTGTCCGCTTGGCATTGGAGAGTCAGAATGAACAACAGAAAGTTCAGCAGCAGCTTGCAAATGAAGCTCGTGTTCGAGAAATAGAAGAAGGCTGGTGTGACAGTGTGGGATCTGTAGAAGAAATCCAAGCTAAAATATTGAAGAGGCAGGAGGCTGCAGCTAAACGTGAGAGAGCCATGGCATATGCTCTAGCTCATCAGTGGCAGGCAGGATCAAGACACCAGGCTGCTTCATCTGGATTTGAACCAGATAAAAGTAGCTGGGGCTGGAATTGGTTGGAAAGATGGATGGCTGTTCGTCCTTGGGAGAACCGTTTTGTTGACACTAATCTAAGGGAGGGAGCAATGGTACATGAAAATGGAGCAATGGATGGTAAAAATGGAACCAGTGCTAACAGCAAACAAATTCTGTCAAACAATCATCAAAAACCTGCAAGTCAGAAAGCTGGACCGGTTCTTTCCGATGGCTGTGGTTCTTCACCTGGTAAGTCAGCAGGCTTGCAGGAAGTAGTGAACATTCAGGCTGTTAAGCCAAATGGTGAAAATGCTATTGAAGAAGCCAATTCAAAACCCAGGATTGGGTCAAGATCTCGTAGTAATCCAAAGGAGAGAACCTCTCAAGGAGATAAGCAGGCCAAAAAACGATTATCTCTGCCTAACAGCGCAGGGGGAGGTCCTGGGGCTCAAACAGCAAGACATCCTAATAGAACAAATGTCAAAGGAACACTCAGCGCCCAAAAGCTCGGTAGGGATAAACCTAAGGTCAATGGAAGAGGGGATGTAAATCTTACTCAGCCAGTTCCACAGCATGCAGGTATGTAG 1287 0.4522 MGVSGKWIRSLIGLKKSEKAESSEKDRNKVGKSRHQRKHSIEFDNGKLQNELDDDVTLPIRDDNDRSNSDVHYSPSTSQQALDTAHNHQIMREEWAAIRIQTAFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRLALESQNEQQKVQQQLANEARVREIEEGWCDSVGSVEEIQAKILKRQEAAAKRERAMAYALAHQWQAGSRHQAASSGFEPDKSSWGWNWLERWMAVRPWENRFVDTNLREGAMVHENGAMDGKNGTSANSKQILSNNHQKPASQKAGPVLSDGCGSSPGKSAGLQEVVNIQAVKPNGENAIEEANSKPRIGSRSRSNPKERTSQGDKQAKKRLSLPNSAGGGPGAQTARHPNRTNVKGTLSAQKLGRDKPKVNGRGDVNLTQPVPQHAGM 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst26235080g00052 428 MobiDBLite consensus disorder prediction 17 85 - -
Arst26235080g00052 428 PANTHER IQ-DOMAIN 5-RELATED 1 379 - -
Arst26235080g00052 428 FunFam IQ-domain 11 92 143 - -
Arst26235080g00052 428 MobiDBLite consensus disorder prediction 336 428 - -
Arst26235080g00052 428 Gene3D - 94 135 - -
Arst26235080g00052 428 MobiDBLite consensus disorder prediction 37 69 - -
Arst26235080g00052 428 MobiDBLite consensus disorder prediction 351 366 - -
Arst26235080g00052 428 ProSiteProfiles IQ motif profile. 117 144 IPR000048 GO:0005515
Arst26235080g00052 428 MobiDBLite consensus disorder prediction 296 320 - -
Arst26235080g00052 428 Pfam IQ calmodulin-binding motif 95 114 IPR000048 GO:0005515
Arst26235080g00052 428 MobiDBLite consensus disorder prediction 70 85 - -
Arst26235080g00052 428 ProSiteProfiles IQ motif profile. 93 121 IPR000048 GO:0005515
Arst26235080g00052 428 SMART iq_5 92 114 IPR000048 GO:0005515
Arst26235080g00052 428 SMART iq_5 115 136 IPR000048 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst26235080g00052 1 413 IQD Protein Family AT3G22190 56.398 2.92e-123 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst26235080g00052 - - gmx:100787148 545.814