Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst26235080g00050 ATGGGTGTCTCAGGGAAATGGATTAGATCATTGATTGGTCTAAAGAAGTCTGAAAAGGCAGAGTCTTCTGAGAAGGACCGAAATAAGGTTGGCAAGTCTCGGCATCAAAGAAAGCATTCGATTGAATTTGATAATGGTAAACTTCAAAATGAGCTTGATGATGATGTGACTCTGCCTATCAGAGATGATAATGATCGTTCAAACTCCGATGTCCATTATTCACCTTCTACTTCTCAACAAGCTCTTGATACTGCACATAATCACCAAATAATGAGGGAAGAATGGGCTGCCATTCGCATTCAAACAGCATTTCGAGGATTCCTGGCCAGAAGAGCACTAAGAGCTTTGAAAGGATTGGTAAGGCTTCAGGCCCTTGTAAGAGGCCATGCAGTAAGAAAACAAGCTGCAATAACATTGCGTTGCATGCAAGCTTTGGTGAGGGTTCAGGCTCGTGTTCGGGCAAGGCGTGTCCGCTTGGCATTGGAGAGTCAGAATGAACAACAGAAAGTTCAGCAGCAGCTTGCAAATGAAGCTCGTGTTCGAGAAATAGAAGAAGGCTGGTGTGACAGTGTGGGATCTGTAGAAGAAATCCAAGCTAAAATATTGAAGAGGCAGGAGGCTGCAGCTAAACGTGAGAGAGCCATGGCATATGCTCTAGCTCATCAGTGGCAGGCAGGATCAAGACACCAGGCTGCTTCATCTGGATTTGAACCAGATAAAAGTAGCTGGGGCTGGAATTGGTTGGAAAGATGGATGGCTGTTCGTCCTTGGGAGAACCGTTTTGTTGACACTAATCTAAGGGAGGGAGCAATGGTACATGAAAATGGAGCAATGGATGGTAAAAATGGAACCAGTGCTAACAGCAAACAAATTCTGTCAAACAATCATCAAAAACCTGCAAGTCAGAAAGCTGGACCGGTTCTTTCCGATGGCTGTGGTTCTTCACCTGGTAAGTCAGCAGGCTTGCAGGAAGTAGTGAACATTCAGGCTGTTAAGCCAAATGGTGAAAATGCTATTGAAGAAGCCAATTCAAAACCCAGGATTGGGTCAAGATCTCGTAGTAATCCAAAGGAGAGAACCTCTCAAGGAGATAAGCAGGCCAAAAAACGATTATCTCTGCCTAACAGCGGGGGAGGTCCTGGGGCTCAAACAGCAAGACATCCTAATAGAACAAATGTCAAAGGAACACTCAGCGCCCAAAAGCTCGGTAGGGATAAACCTAAGGTCAATGGAAGAGGGGATGTAAATCTTACTCAGCCAGTTCCACAGCATGCAGGTATGTAG 1284 0.4517 MGVSGKWIRSLIGLKKSEKAESSEKDRNKVGKSRHQRKHSIEFDNGKLQNELDDDVTLPIRDDNDRSNSDVHYSPSTSQQALDTAHNHQIMREEWAAIRIQTAFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRLALESQNEQQKVQQQLANEARVREIEEGWCDSVGSVEEIQAKILKRQEAAAKRERAMAYALAHQWQAGSRHQAASSGFEPDKSSWGWNWLERWMAVRPWENRFVDTNLREGAMVHENGAMDGKNGTSANSKQILSNNHQKPASQKAGPVLSDGCGSSPGKSAGLQEVVNIQAVKPNGENAIEEANSKPRIGSRSRSNPKERTSQGDKQAKKRLSLPNSGGGPGAQTARHPNRTNVKGTLSAQKLGRDKPKVNGRGDVNLTQPVPQHAGM 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst26235080g00050 427 MobiDBLite consensus disorder prediction 17 85 - -
Arst26235080g00050 427 Pfam IQ calmodulin-binding motif 95 114 IPR000048 GO:0005515
Arst26235080g00050 427 MobiDBLite consensus disorder prediction 336 427 - -
Arst26235080g00050 427 FunFam IQ-domain 11 92 143 - -
Arst26235080g00050 427 PANTHER IQ-DOMAIN 5-RELATED 1 379 - -
Arst26235080g00050 427 Gene3D - 94 135 - -
Arst26235080g00050 427 MobiDBLite consensus disorder prediction 37 69 - -
Arst26235080g00050 427 MobiDBLite consensus disorder prediction 351 366 - -
Arst26235080g00050 427 ProSiteProfiles IQ motif profile. 117 144 IPR000048 GO:0005515
Arst26235080g00050 427 MobiDBLite consensus disorder prediction 296 320 - -
Arst26235080g00050 427 MobiDBLite consensus disorder prediction 70 85 - -
Arst26235080g00050 427 ProSiteProfiles IQ motif profile. 93 121 IPR000048 GO:0005515
Arst26235080g00050 427 SMART iq_5 92 114 IPR000048 GO:0005515
Arst26235080g00050 427 SMART iq_5 115 136 IPR000048 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst26235080g00050 1 412 IQD Protein Family AT3G22190 56.532 4.22e-125 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst26235080g00050 - - gmx:100787148 550.436