Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst26235080g00039 ATGGCAACGTACTTTCATGGAAGCAATTCTGAAATGCAATCTTCTTCGCCTTCAGCTTCCGCTTCTGGTGCAGATGGTGGCTTGCAGACACTTTACCTTATGAACCCAAACTACCACCACGTGCCCTATTCTGACGCGCCGACGCAAAACATGCTTCTTCTTAATCCTAACCACCAAGCTCACGCGCTCAACCTCGCCAACTTATCCCACGCGCCCCCTCCACCACACCACCAACTACTCATTCATCGACTTCCCAACTCCGACGACAACACCCGGGCCTCTCTCTTCGGACACCACGACATCGCCACGGCTACCGCCCCGCCCACTTTCCACGGCTTCTCTGCGCCGCGCGTGCAGTACAATCTGTGGGGCTCTGTGGTCGACCAGCCTCAGCCGTCGCCGTCCAGCAGCTCCGGAGGCGCCGACATGGGTTTCCGGCGGCCTACTCAGCAGGGCTTATCGCTCAGCCTCTCCTCACAGCAGCAGCAGCAGCAGCAACAGCAACAAACAGGTACCTATAGGTCTCTCTCCGGCGAGGTTGAAGTTGCCGTTGCCGGAGGTGTCGGTAACTCGCCGTCATCGGCGTCGAACGGGATCTCGGGCGTGCAGGGTGTTCTGTTGGGATCAAAGTACCTGAAAGCCGCACAGGAGCTTCTTGACGAGGTGGTGAACGTGGGCAATAAGGGAATTTCAAAGGAGGAGTTGGCAGAGAAGGTGAAGCCCAATAGGGAATCAAATTCTGGCGTGGGCGAAGGATCCAGTGGCGGCGGCGGAGAGAACAGTGACGCCGGGAAGCATGTTGCTGAACTGACCACTGCTCAGAGACAAGAGCTTCAGATGAAGAAATCCAAGCTTGTCTCCATGCTCGATGAGGTGGAACAAAGGTACCGGCAATACCACCACCAAATGCAAGTTGTGATATCATCGTTTGAGCAAGCGGCGGGTTTCGGGGCGGCCAAATCGTACACGTCGCTAGCCCTAAAGACAATCTCGAAGCAATTCCGGTGCCTTAAGGATGCCATATCTTCACAGATAAGAGCAACGAGCAAGACATTGGGAGAGGATGATTGCTTAGGAGCTAAGGTAGAAGGTTCCAGGCTTAGGTATGTGGATCACCATCTTCGTCAACAAAGGGCACTGCAGCAACTTGGAATGATTCAACCCAATGCTTGGAGGCCACAAAGAGGCTTACCTGAACGCGCTGTTTCAATTCTTCGTGCATGGCTTTTTGAGCATTTCCTTCACCCTTATCCTAAGGACTCTGATAAAGTGATGCTAGCAAAGCAAACTGGACTTACTAGGAGCCAGGTGTCTAACTGGTTCATCAATGCCCGGGTTCGGCTATGGAAACCAATGGTTGAGGAAATGTACATGGAAGAAGTGAAGGAGCAAGAAAACAATAACAATAACAACAACAACAACAACGGTTCGGAGAGATCAAAGGAATCAAGCAAGGAGTTAGGTTCAGCTTCAAATGCTACTACTAATAATGGAGCTCCTGATAATAATAACAATAATAATCCAGTTCTTGATCCCATAAAAGTTCTTCATCAATCAAAACAAGAATGCTTCAACAACAACAGCTCTCCAACCGGCGCCGGCGAGATCTCGGTGAATTCTTCCTTGTCCACTTCTCCCATGGGTGGAGGAGTAGGATCCCTTCAATCCCACAGCGGTTTCCATCTTGCAGGTTCCTCTGACATGCAAATTAGGAGCCCAAACAAGGCTAGAAACGCTTCCGAAATTATGCATAACTCCCCAAGTAGTATCCTCTCAGTGGACATGGAAATGAAGCACATCAATGGGGATCATCATAGAGAACCCAATAGTATCACTGGTTATGGAGCTTTCTCAATGGAAGACATTGGAACCAGGTTCAGTACTGTCACTGATCATCATCATCATCAATTAGGTTCTTCAAGGTTCCAAGGAAACAATGGTGTGTCTCTCACCCTGGGGCTTCCACACAACGACAACAGTGTTCCTATCTCCGCAACTCAACATGGATTTCTTCCACAGAATATGCATAGTTTGGGAAGGAGACTTGAGATTGGAAACAATGGGAACGAGTTTTGTGTGATCAACAATCCAAGTTCTTCTCACCCTGGACCTACCTATGAAAGCATTGACATTCAGAACAGAAAGAGGTTTGCTGCACAGTTATTGCATGATTTTGTGGCTTGA 2184 0.4963 MATYFHGSNSEMQSSSPSASASGADGGLQTLYLMNPNYHHVPYSDAPTQNMLLLNPNHQAHALNLANLSHAPPPPHHQLLIHRLPNSDDNTRASLFGHHDIATATAPPTFHGFSAPRVQYNLWGSVVDQPQPSPSSSSGGADMGFRRPTQQGLSLSLSSQQQQQQQQQQTGTYRSLSGEVEVAVAGGVGNSPSSASNGISGVQGVLLGSKYLKAAQELLDEVVNVGNKGISKEELAEKVKPNRESNSGVGEGSSGGGGENSDAGKHVAELTTAQRQELQMKKSKLVSMLDEVEQRYRQYHHQMQVVISSFEQAAGFGAAKSYTSLALKTISKQFRCLKDAISSQIRATSKTLGEDDCLGAKVEGSRLRYVDHHLRQQRALQQLGMIQPNAWRPQRGLPERAVSILRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYMEEVKEQENNNNNNNNNNGSERSKESSKELGSASNATTNNGAPDNNNNNNPVLDPIKVLHQSKQECFNNNSSPTGAGEISVNSSLSTSPMGGGVGSLQSHSGFHLAGSSDMQIRSPNKARNASEIMHNSPSSILSVDMEMKHINGDHHREPNSITGYGAFSMEDIGTRFSTVTDHHHHQLGSSRFQGNNGVSLTLGLPHNDNSVPISATQHGFLPQNMHSLGRRLEIGNNGNEFCVINNPSSSHPGPTYESIDIQNRKRFAAQLLHDFVA 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst26235080g00039 727 MobiDBLite consensus disorder prediction 463 511 - -
Arst26235080g00039 727 MobiDBLite consensus disorder prediction 486 511 - -
Arst26235080g00039 727 Pfam Associated with HOX 205 342 IPR006563 -
Arst26235080g00039 727 CDD homeodomain 391 452 IPR001356 GO:0003677
Arst26235080g00039 727 Coils Coil 454 474 - -
Arst26235080g00039 727 Coils Coil 275 295 - -
Arst26235080g00039 727 SMART prehox3 200 343 IPR006563 -
Arst26235080g00039 727 SUPERFAMILY Homeodomain-like 392 458 IPR009057 -
Arst26235080g00039 727 MobiDBLite consensus disorder prediction 236 264 - -
Arst26235080g00039 727 SMART HOX_1 391 455 IPR001356 GO:0003677
Arst26235080g00039 727 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 156 475 - -
Arst26235080g00039 727 MobiDBLite consensus disorder prediction 125 174 - -
Arst26235080g00039 727 MobiDBLite consensus disorder prediction 463 478 - -
Arst26235080g00039 727 Pfam Homeobox KN domain 408 447 IPR008422 GO:0003677|GO:0006355
Arst26235080g00039 727 FunFam BEL1-like homeodomain protein 9 394 456 - -
Arst26235080g00039 727 MobiDBLite consensus disorder prediction 523 584 - -
Arst26235080g00039 727 ProSiteProfiles 'Homeobox' domain profile. 388 451 IPR001356 GO:0003677
Arst26235080g00039 727 MobiDBLite consensus disorder prediction 1 23 - -
Arst26235080g00039 727 Gene3D - 388 465 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst26235080g00039 1 727 Homeobox Transcription Factor Family AT2G35940 44.574 4.85e-137 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Arst26235080g00039 POX 6.1e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst26235080g00039 - - gmx:100779075 743.421