LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst26235080g00037	ATGGGGTTTTTGCTGAAAGAAGCTTTAAAGACTCTGTGCGGTCGGAATCAGTGGTCTTATGCTGTGTTCTGGAAGATCGGATGCAACAATTCAAAACTATTGATCTGGGAAGAATGTTATTATGAACCATTGCCATGTTCTTTCCCACAACCAAATTTTGGGAATGGAGAAGGAAGCTGGTTTTCTTCTGAGTCTCACTCGTCTCAGATGGGGATCCAAGAGGAGGACAGAGTTTGTTCTTTGATTAACAAAATGACAGTGAATAATTCAGTCAATATCGCAGGTGAAGGAATAATTGGACGTGCTGCATTTACTGGCAACCATCAGTGGATTCTTTTCAACAATTTCAGTAGAGATGCATATCCACCTGAGGTATATGCTGAGATGCATCACCAACTTTCAGCTGGAATGCAGACTGTTGCAGTGATTCCTGTGCTTCCCCATGGGGTTGTTCAACTTGGATCTTTCTTGCCAATAATGGAGAATATTGGGTTTGTAAATGATGTAAAGAGCTTGATCTTGCAACTTGGATGCATTCCCGGTGCCCTTCTATCGGAAGATTATTCAGGAAGTCCTTCCATTGGAAGAGCACTTGCTACTGGTGGCTTGCCTGTCTCTGTCAAACCACCTGCAATTCCCTCACATTGCATTCCATCAGTATCTAATGGTTCAAATGAGCAAAGTAACCCATCTCATGTTTCAAGGCCAACTGTTCAAACACTCTGTCCTATAAGGGGAGAAATGAATAACTTCCAAGGTTCAGTATTGACTCCCAAAACTAATAACCTGAGCCAGATATCAAATGGTTATTGCCAACCAAATGCTACTACATTGATTAAAACAAACTTTGCTGGCCAAAGTGAGAATAGGGTTGTGGAGGCTGAAGTGATACCCTCAAGCAGAGGTTCATGCCTACAGCAGCCTTCTGTTTCATATAATGCAAGATCTGCATTCAATGGCTTATCCAGTTTCGGTCAATCAGTTCCAAGCGATTGCAATCTAAAATATATGGAGCAACAAATGATGTCAGTCCTTGGGAATCAAGGTCACAGTAATCCTAGTATAAATGCATCAAGTACATTAAACATGTCTCTACTAAAGACAGATGGAGGCCATATACTTGGTCACAATCAAAGTTCTAGCAGTGCTTCATTACTTGCTGGAATACCAATACATGGTGGGGTGAGTAGTCTTTTGAGGACAAGTCTTGTTACTGATTCTGGTTTAAGAACTCCAGATGTGTCCGTTGGTGATTTATCCGGAGCACAAGGCGGTGGGTTTGGAGTTAAAAGTGATGGTTCAAGTGAAGCAGGTGGTTGTTCTCTGGCTAATTTTTTCAGTCATTCAGGTTCCTTTACTGTGCCTACGGAAGGTTCTGATCAGAAGCTTCTCTCTGTAGATGTGAAGGATGTTCATGACGCTTTACCTTCAAAGCCTGTGACTACCGGAGGTCAAAGCCCTGATTTTGTCCAAGATTGTGTTAATAAACATGTTACTGGTCGATCTATGGTGAAGAATGTTAAACAAGAACAAGTTTGTGCTCAACCGTCATCAGGTGATGATCTGTTTGATATTCTAGGAGCAGATTTCAAAAACCAACTTCTGAGTGGAAACTGGGATAAGTTGTTTGCTGTTGGATCTGAATCTAATACAGAAAATATGGATAAAAAGCCAACATGTATGAATATGCAGGGTATGAACTCTGATTATTACTCTGCAAGTGAAGCAATATCAGAGAGTGACATTTTTTCTGGGACAGGCACAGACCACCTCTTGGATGCTGTGGTTTCAAAGACCAAATCTGTCATGAAACAGAATTCTGATGACATGTCTTGCAGGACAACTTTGACAAGTAGTACCTGTTCAGTTCCCTCTCGTGCCTACAAGCCGGCTATGCCTGATCATATCCAGGGTGGGATGTTTGGTATTCCTAAGAGTGAGGGTAAAACAGGTGCTGTTGAAAATTCCATGAGGTCTGGATGTATTAAGGACGACGGTGGAAAGTGTTCCCAAACTTCTTCTATGTTTGGGTCCCAACTTAGTTCATGGGTTGAAAATAGTAGCAAGCTTAAGCTTGAAAATAGTGTTTCGACTGGATACTCCAAGCGACCTGATGAAGTTTGCAAATCGAATCGCAAAAGGCTTAAACCGGGAGAGAATCCTAGGCCTCGACCTAAGGATCGCCAAATGATTCAAGATCGTGTAAAAGAGTTACGGGAAATTGTGCCAAATGGAGCAAAGTGTAGCATAGATGCACTTCTGGAACGTACCATCAAGCATATGCTTTTTTTGCAGAGTGTGACAAAGCATGCTGACAAGCTGAAACAAACTGGGGATTCAAAGATTATCAGCAAGGAAGGTGGACTGCTTTTGAAAGACAACTTTGAGGGAGGGGCTACATGGGCATACGAGGTTGGCTCACAATCAATGGTTTGCCCTATTATAGTTGAGGATCTGAACCATCCTCGTCAGATGCTAGTGGAGATGCTTTGCGAGGAACGAGGTTTCTTTCTGGAAATAGCTGATTTAATCAGAGGATTAGGCTTAACTATACTAAAGGGGGTAATGGAAGCAAGAAATGACAAAATCTGGGCTCGTTTCGCCGTTGAGGCGAATAGGGACATAACAAGGATGGAAATATTTATGTCGCTGGTTCGGCTTTTGGACCAAACGGTGAAGGGAAATGCGTCTTCATCGAATGCAGGTGACAAGAACATGATGGCATATCAATCTTTTCCGCAAGCTACCCAGATTCCGGCAACTGGTAGGCCTAGTAGTTTGCAATGA	2787	0.4241	MGFLLKEALKTLCGRNQWSYAVFWKIGCNNSKLLIWEECYYEPLPCSFPQPNFGNGEGSWFSSESHSSQMGIQEEDRVCSLINKMTVNNSVNIAGEGIIGRAAFTGNHQWILFNNFSRDAYPPEVYAEMHHQLSAGMQTVAVIPVLPHGVVQLGSFLPIMENIGFVNDVKSLILQLGCIPGALLSEDYSGSPSIGRALATGGLPVSVKPPAIPSHCIPSVSNGSNEQSNPSHVSRPTVQTLCPIRGEMNNFQGSVLTPKTNNLSQISNGYCQPNATTLIKTNFAGQSENRVVEAEVIPSSRGSCLQQPSVSYNARSAFNGLSSFGQSVPSDCNLKYMEQQMMSVLGNQGHSNPSINASSTLNMSLLKTDGGHILGHNQSSSSASLLAGIPIHGGVSSLLRTSLVTDSGLRTPDVSVGDLSGAQGGGFGVKSDGSSEAGGCSLANFFSHSGSFTVPTEGSDQKLLSVDVKDVHDALPSKPVTTGGQSPDFVQDCVNKHVTGRSMVKNVKQEQVCAQPSSGDDLFDILGADFKNQLLSGNWDKLFAVGSESNTENMDKKPTCMNMQGMNSDYYSASEAISESDIFSGTGTDHLLDAVVSKTKSVMKQNSDDMSCRTTLTSSTCSVPSRAYKPAMPDHIQGGMFGIPKSEGKTGAVENSMRSGCIKDDGGKCSQTSSMFGSQLSSWVENSSKLKLENSVSTGYSKRPDEVCKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQTGDSKIISKEGGLLLKDNFEGGATWAYEVGSQSMVCPIIVEDLNHPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEARNDKIWARFAVEANRDITRMEIFMSLVRLLDQTVKGNASSSNAGDKNMMAYQSFPQATQIPATGRPSSLQ	928

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst26235080g00037	928	PANTHER	TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED	1	922	IPR043561	GO:0003700\|GO:0006355
	Arst26235080g00037	928	Pfam	bHLH-MYC and R2R3-MYB transcription factors N-terminal	5	172	IPR025610	-
	Arst26235080g00037	928	ProSiteProfiles	Myc-type, basic helix-loop-helix (bHLH) domain profile.	715	764	IPR011598	GO:0046983
	Arst26235080g00037	928	CDD	bHLH_AtLHW_like	719	788	-	-
	Arst26235080g00037	928	MobiDBLite	consensus disorder prediction	695	729	-	-
	Arst26235080g00037	928	MobiDBLite	consensus disorder prediction	217	236	-	-
	Arst26235080g00037	928	MobiDBLite	consensus disorder prediction	705	729	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst26235080g00037	494	907	Basic Helix-Loop-Helix Transcription Factor Gene Family	AT2G27230	50.812	1.43e-113	361

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst26235080g00037	-		-	gmx:100787748	1230.31