Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst26234973g00001 ATGATGCTCGAGTATGATAATCTCTACAGAGATTCCCCTAAAATCGCTCGCATAAGGCTCTTCGTCTTCCCTGGCAACCATTTCAATTTGGATCGCAATCCCGCTTCCACCGAAACCCTAAAAACCAAGAAGACAGTCAAACAAAACTCCAAAGTCAACGGCGACAGTTTAGTTGTTGTTCTTCCGCCTCCGCCAGTTGATGTTAAAACAGAGCGGATTGATTGTTCTGATCCGACCCGATTTAATAGCCTGTTATCTGCTGCAAAGTATGATGTGTTTCTGAGCTTCAGAGGCGAAGACACACGCAACGGTTTCACTTCCCATCTTTGTAAAGCTCTGTCGCGAAAGCAGGTAAAGACCTTCGTGGATTTTACTGTTCAGAAGGGAAATGAGATCTCTGCTTCGATCCACCAAGCAATTGAAGAGTCGTTCGTATCGGTGGTTGTGTTCTCGGAGAACTATGCTTCTTCAAAGTGGTGCTTGGAAGAGCTTGTGAAAATAATGGAGTGCAGTAAAGAAAATGGACTGGTTGCTGTTCCTGTGTTCTATAAAATAGATCGATCACATGTGCGGAAGCAGCTTGGAAGTTACAGTGAAGCATTAAAGAAGTTACAGAATAATAGCATGAAGAAGGTTCAGAAATGGAGGGAAGCTCTCACTGAAGCAGCAAATTTATCTGGGTGGGTCTCCAGCTCCTGCAGGGATGAGTCTGAGCTCATTCAAAAGATTGTGAAAGACGTTTTGCAGAAGCTGATTGATCACAACCCACCGAATGATATTAAAAGTTTTGTAGGTATTGACGGAAATCTTAAAGCTATAGATTCGTCGCTAAGAGAAGTCCTTGAAGTCCAAACAAGAATGATTGGGATTTGGGGCATGGGTGGGATAGGAAAGACCACTCTAGCAAAACTTGTATTCGAGAAATACTCTTATCAGTATGAAGGGTCCTGCTTCTTGGAAAATGTTAGAGAAAGATCAGAAAAATATGGACATGCGCTACATGAATTACGCAATGAACTTTACTCAGAGTTGTTGCAGGAAAATAATTGCAAAGACAGCACAAGAATATCCACCAATGCTAAGGAAAGGCTCCGCAGTCAAAGAAATTTCATAGTTCTTGATGACGTGAGTTGTTCAAAGCAATTAAAATACCTTGTTGGGGAGCATCAATGTTATGGTCCAGGTAGTAAGATCATTGTCACAGCTACAGACAAGAGTGTATTTGCTCAATGGGAAGATGAAGAAATATATGAGATGAAGGTGTTAAATTCTAAAGACTCCCTTACATTGTTTAGCTTGAATGCATTCAATCAAGACCATCCGAAAATGGGATATGAAAAGCTATCATGGGAAGCAGTTAAATATTGTGAAGGTTTACCATTAGCTTTAAAAGTATTGGGTTCTTTTCTTCGTTCCAAGAGTGAAACTGAATGGGATAGTGCATTGCAAAACATCAAGAAGATTCCTGATGCACCAATTCAAAATGTATTAAGGTTGACTTATGATGCATTAAATTATGAGGAGAGAGAAATTTTTCTAGACATTGCATGTTTTTTTAAGGGATTCCTTAAAGAACACGTAGTTAGTCTGTTAGAAAGTTGTGGCTTCGATGCAGCTAATGGCATGAGGTCCCTTCATGAAAAGTCTCTAATAGCTATATCTGATAATTCTCTGAGGATGCATGACTTGATCCATGAAATGGCTTTGGAAATTGTTCGCAAAGAATCTATCAAAAATCCTGAATATCGTAGCCGTTTGTGGGACTATAATGATATTAGGGATGTTTTGGGAAACAACAAGGGAACCGATGCAATTGAAAGCATAATGTTAGATATGTCTCATATAGATGATCTACAGTTGAGTGTTGACACATTCAAAAAGATGTCTAGATTAAGATTGCTCAAATTGTATGACTCGTCAGAGAAGAATGGTAAATTAAGTAATCTGCAGCTTCCTATAGGGTTGAAGCCATTAAGGTACTTTGAATGGCATGCGTACCCTTTGCCGACTCTGCCATCAAACTTTTGTCCCGAGAAGCTTGTTACCCTCCGTATTCAGAACAGTCAACTTGCAAGACTATGGGATGGAAAGCAGAATCTTGTGGATTTAGAGGAAGTAGATCTAACTGGGTGCCAAAAGTTGGTAGAACTCCCAGATCTCTCTAAAGCAAAAAATCTTAAAAGTGTACATCTGTCCAACTGTAGAAGTTTGGCCCATGTCCATCCATCTATTTTATCACTTGGCAAGCTTGAGCTTTTGGATCTATTGAATTGCATTAAGCTTGAAATGCTTGGAAACAAGAAGCATTCAAGATCTCTTAAGCACCTGTGCGTTGCTGGCTGCTCAAATTTGTTAGAATTTGCTCTATCTTCAGAAGAAATAGAATACTTGGATTTAAGCCACACTGGCATCAAAGTATTGCACCCATCCATTGGGCGTTTCACCAAAGTGAAAGAGATATCTCTTCGTGGGATAAGACTTAAGAATCTTCCAGACGGGTTGTCTCGCTTGAAATCTCTCATTTCAAGCGAGAAACTTTCGCTCTTTAAATGTGGAAGGGTGGTTTCCAAGCAGAAATTACATGATATATTTGATGGCTTGCAATCATTGCAAAACCTGTCTCTGGTGAACTGTGATAGTCTATTTGAACTCCCTGGAAATGTCGGCCGCTTATCATCGTTACAAAAGTTACAGTTGGATGGAAGCCATGTGGAGACTTTGCCTGGGAGCATCAAGCATCTTCCAAATCTGAAAACACTCTCATTAATAGGTTGTAAGATGCTTCAATATTGGCCAGAGCTTCCTCCATCCATTCGACATTTGAAGGCCCTAAACTGCACATTGCTGCAAAAAGTAGCATTTGGTTTATTTAGTTATGAGCTACAAGAAGAAAAACGCGTAAGTATTTCGTTGCAGAATTGTGTGAATTTGGATGTGGAGAACTGTATTTATTCATTCCTTCAACATGTAAGAAAACAGGCATATGAATGTGAATTTAGGAGGAGAGGAGTAGGAAGAGAAAACATTGTAGTTTGGAGAAGTGACTTCTTTAAAATTTGTTACCCGGACTCCAGAGTACCAGAGTGGTTCACATATCGGGCAGTGGGGTCTTCTATTACTTTTGAAGTTGCTCCTCCTTCCAGTTACTATTTTGGTTCGCTTCTCTGCATTGTTCTCTCTTCGCACAGTTTGGATTTCGAGCTTGATATTAAATGCAGATGCTACTTGGAAGATGGAAAAATGCACAAGTATTCGCTTGGCATATTATTTTTAAGTCACGTTCCAGTGGAAGGGCATTCAGATCATGTTTATATGACGTATAACTTCAACGGAATCTTCGATGTGATCAAGCTGGACCAATTGAATAATAAGATTGCCTCCTCCGGACATAAACCAAAACTCACCTTTGAATTCTTTGTTAGCAGTGGCATGGCTCGGGGAAAAAAAGATTTAAATTTGTTGATCAAAGAGTGTGGTGTCTATCCGTTAAATGACTCCAATAATTGCGTGGAATAG 3516 0.3982 MMLEYDNLYRDSPKIARIRLFVFPGNHFNLDRNPASTETLKTKKTVKQNSKVNGDSLVVVLPPPPVDVKTERIDCSDPTRFNSLLSAAKYDVFLSFRGEDTRNGFTSHLCKALSRKQVKTFVDFTVQKGNEISASIHQAIEESFVSVVVFSENYASSKWCLEELVKIMECSKENGLVAVPVFYKIDRSHVRKQLGSYSEALKKLQNNSMKKVQKWREALTEAANLSGWVSSSCRDESELIQKIVKDVLQKLIDHNPPNDIKSFVGIDGNLKAIDSSLREVLEVQTRMIGIWGMGGIGKTTLAKLVFEKYSYQYEGSCFLENVRERSEKYGHALHELRNELYSELLQENNCKDSTRISTNAKERLRSQRNFIVLDDVSCSKQLKYLVGEHQCYGPGSKIIVTATDKSVFAQWEDEEIYEMKVLNSKDSLTLFSLNAFNQDHPKMGYEKLSWEAVKYCEGLPLALKVLGSFLRSKSETEWDSALQNIKKIPDAPIQNVLRLTYDALNYEEREIFLDIACFFKGFLKEHVVSLLESCGFDAANGMRSLHEKSLIAISDNSLRMHDLIHEMALEIVRKESIKNPEYRSRLWDYNDIRDVLGNNKGTDAIESIMLDMSHIDDLQLSVDTFKKMSRLRLLKLYDSSEKNGKLSNLQLPIGLKPLRYFEWHAYPLPTLPSNFCPEKLVTLRIQNSQLARLWDGKQNLVDLEEVDLTGCQKLVELPDLSKAKNLKSVHLSNCRSLAHVHPSILSLGKLELLDLLNCIKLEMLGNKKHSRSLKHLCVAGCSNLLEFALSSEEIEYLDLSHTGIKVLHPSIGRFTKVKEISLRGIRLKNLPDGLSRLKSLISSEKLSLFKCGRVVSKQKLHDIFDGLQSLQNLSLVNCDSLFELPGNVGRLSSLQKLQLDGSHVETLPGSIKHLPNLKTLSLIGCKMLQYWPELPPSIRHLKALNCTLLQKVAFGLFSYELQEEKRVSISLQNCVNLDVENCIYSFLQHVRKQAYECEFRRRGVGRENIVVWRSDFFKICYPDSRVPEWFTYRAVGSSITFEVAPPSSYYFGSLLCIVLSSHSLDFELDIKCRCYLEDGKMHKYSLGILFLSHVPVEGHSDHVYMTYNFNGIFDVIKLDQLNNKIASSGHKPKLTFEFFVSSGMARGKKDLNLLIKECGVYPLNDSNNCVE 1171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst26234973g00001 1171 SMART till_3 89 225 IPR000157 GO:0007165
Arst26234973g00001 1171 SUPERFAMILY Toll/Interleukin receptor TIR domain 86 228 IPR035897 -
Arst26234973g00001 1171 FunFam Disease resistance protein (TIR-NBS-LRR class) 423 505 - -
Arst26234973g00001 1171 FunFam Disease resistance protein (TIR-NBS-LRR class) 86 253 - -
Arst26234973g00001 1171 ProSiteProfiles TIR domain profile. 88 251 IPR000157 GO:0007165
Arst26234973g00001 1171 Gene3D - 86 248 IPR035897 -
Arst26234973g00001 1171 Coils Coil 319 339 - -
Arst26234973g00001 1171 Pfam NB-ARC domain 270 487 IPR002182 GO:0043531
Arst26234973g00001 1171 Gene3D Ribonuclease Inhibitor 595 771 IPR032675 -
Arst26234973g00001 1171 Gene3D Ribonuclease Inhibitor 792 996 IPR032675 -
Arst26234973g00001 1171 Coils Coil 187 207 - -
Arst26234973g00001 1171 Gene3D - 421 505 IPR042197 -
Arst26234973g00001 1171 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 90 787 IPR044974 GO:0006952
Arst26234973g00001 1171 Pfam TIR domain 89 256 IPR000157 GO:0007165
Arst26234973g00001 1171 PRINTS Disease resistance protein signature 363 377 - -
Arst26234973g00001 1171 PRINTS Disease resistance protein signature 912 928 - -
Arst26234973g00001 1171 PRINTS Disease resistance protein signature 456 470 - -
Arst26234973g00001 1171 PRINTS Disease resistance protein signature 287 302 - -
Arst26234973g00001 1171 SUPERFAMILY L domain-like 559 950 - -
Arst26234973g00001 1171 Gene3D - 249 419 IPR027417 -
Arst26234973g00001 1171 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 248 515 IPR027417 -
Arst26234973g00001 1171 Pfam C-JID domain 1022 1160 IPR045344 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst26234973g00001 86 897 WRKY Transcription Factor Family AT4G12020 33.574 1.14e-97 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst26234973g00001 - - adu:107472645 2308.49