Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst26234898g00002 ATGGATGATCCAACTGTGAATTGGGCAAAAGAAAGGTATGATGAGATTGAGTCAAAGATGATTCCATTTTTGAGACAATCAGGATACAATGTGAAGAAAGATGTCATGTTTTTGCCAATATCTGGTCTGATTGGCACCAACTTGCAAACAAGAGTGGATAAAAGCATTTGCTCATGGTGGGATGGCCCTTGCTTATTTGAAGCGCTTGATGCTGTTGAAGTTCCTCTACGAGACCCCAATGGTCCTTTCAGGATGCCTATACTTGATAAATTCAAAGACATGGGAACTGTCGTTATGGGGAAAGTGGAATTTGGCAGTGTCCGTGAGGGAGATTCCTTGTTGGTCATGCCAAATAAGGATCAAGTTAAAGTTGTTGCTGTATTCATTGATGAAAATCGGGTTAGGCGTGCAGGACCTGGTGAAAATTTACGGATTAGGTTATCAGGTGTTGAAGAGGAGGATATATTATCTGGGTTTGTTCTGTCTAGTGTTGCAAATCCAGTGCCAACTGTTACTGAGTTTGTTGCTCAGCTGCAAATCCTTGAATTGCTGGACAATGCTATTTTTACTGCTGGGTACAAGGCTGTATTGCATATACACTCTGTTGTTGAAGAATGTGAAATTGTTGAGCTGTTACAGCAAATAGATCCAAAGACAAAGAAACCAATGAAAAAGAAAGTGCTATTTGTGAAGAATGGTGCTGTTGTTGTGTGCCGTGTTCAGGTTAGTAACACGATATGTGTTGAGAAGTTTTCTGATTTTCCGCAACTAGGGAGATTCACTCTTCGCAGTGAAGGAAAAACTGTTGCGGTTGGGAAAGTCACTGGTGTGTGA 834 0.4113 MDDPTVNWAKERYDEIESKMIPFLRQSGYNVKKDVMFLPISGLIGTNLQTRVDKSICSWWDGPCLFEALDAVEVPLRDPNGPFRMPILDKFKDMGTVVMGKVEFGSVREGDSLLVMPNKDQVKVVAVFIDENRVRRAGPGENLRIRLSGVEEEDILSGFVLSSVANPVPTVTEFVAQLQILELLDNAIFTAGYKAVLHIHSVVEECEIVELLQQIDPKTKKPMKKKVLFVKNGAVVVCRVQVSNTICVEKFSDFPQLGRFTLRSEGKTVAVGKVTGV 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst26234898g00002 277 SUPERFAMILY Translation proteins 74 167 IPR009000 -
Arst26234898g00002 277 CDD eRF3_II 82 163 - -
Arst26234898g00002 277 Gene3D - 1 75 IPR027417 -
Arst26234898g00002 277 PANTHER TRANSLATION FACTOR 1 276 - -
Arst26234898g00002 277 Pfam Elongation factor Tu C-terminal domain 168 277 IPR004160 -
Arst26234898g00002 277 FunFam Putative translation elongation/initiation factor family protein 169 277 - -
Arst26234898g00002 277 Pfam Elongation factor Tu domain 2 95 161 IPR004161 GO:0005525
Arst26234898g00002 277 CDD eRF3_C_III 169 275 - -
Arst26234898g00002 277 Gene3D Translation factors 80 165 - -
Arst26234898g00002 277 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 79 165 - -
Arst26234898g00002 277 Gene3D Translation factors 170 277 - -
Arst26234898g00002 277 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 171 276 IPR009001 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst26234898g00002 6 275 Eukaryotic Initiation Factors Gene Family AT5G10630 34.783 4.73e-44 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst26234898g00002 K03267 - gmx:100784412 481.485