Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst26234636g00001 CAAAATACAAACGCTTCGCCGTCCTCTCCGGCCGCCGTGGACACGGCGCCGTTCCTCCTCCGAAGCCGCCGCTTCCTCCGGCGCACACCACCTCCACTTCGTACGGCGGCTCGTCTCTTCCGTCAGGCCTCAGGGCGGAGAATGATGCTCCGGGAATCATCGGTTCGGGTCCGGGAGGCGGCGGCGGCGGAGCTTGAGGGGCGGCAGAGCGACTGGGCCTACTCGAAACCGGTGGTGGTGGTGGACGTGCTTTGGAACCTGGCGGTTGCTCTTGTTGGCGCGGCGGTGCTGTGCGTCAGCACGAAAGAGGAGCCATGTGTTCCCTTGAGGGTGTGGATCGTAGGGTACTTGTTGCAAGGTTTGATTCATTCGCTGTGTGTTGTTGTGGAGTTCAATAAAAGAAGGAGAGTGCGGAGGAGCCAAGACGGTTCTACTTCTTCTAGTGGTGGTGCTGATAGGGAATGGAGTTTCAGCTCTGAGAGCGATGATTTGGATTATGATAATGTTGAGCGCTTTCTGCACACTGATGATAACAG 536 0.5802 MQNTNASPSSPAAVDTAPFLLRSRRFLRRTPPPLRTAARLFRQASGRRMMLRESSVRVREAAAAELEGRQSDWAYSKPVVVVDVLWNLAVALVGAAVLCVSTKEEPCVPLRVWIVGYLLQGLIHSLCVVVEFNKRRRVRRSQDGSTSSSGGADREWSFSSESDDLDYDNVERFLHTDDNSITKHVESANTMLSFIWWVIGFYWVTAGGQNLTRDSPQLYWICITFLAFDVVIVLLCVAVACLIGIAVCCCLPCILAILYVVADQEGATKEEIEQLPKYKFRVIKESKKEDDIPESSKGIMMQCDSEATAEHAIALEDAECCICLSAYDDGAELRELPCNHHFHCTCIDKWLLLNATCPLCKLNILRTSNHHQEV 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst26234636g00001 374 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 296 366 IPR013083 -
Arst26234636g00001 374 Pfam Ring finger domain 319 361 IPR001841 -
Arst26234636g00001 374 PANTHER TARGET OF ERK KINASE MPK-1 41 366 - -
Arst26234636g00001 374 ProSiteProfiles Zinc finger RING-type profile. 320 361 IPR001841 -
Arst26234636g00001 374 SMART ring_2 320 360 IPR001841 -
Arst26234636g00001 374 SUPERFAMILY RING/U-box 309 366 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst26234636g00001 6 371 C3H Transcription Factor Family AT1G68070 48.774 1.23e-117 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst26234636g00001 - - gmx:100795425 536.569