LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst26234487g00355	ATGAGTTGCTTTGCATGGTGTAATACATCAGACCCAAGGATTAAGAGGTCATTGAGGAGGAGCATTGGGGATTACCATGGAGGAAAAACTCTTGCAGCATTTGCCAACATGTCTTTTAAAACTGATAGTGGCAAGAGAAAATTTATAGAGGAGATAGCAAGACTTGGAAAAGGGAATATTACCTCAAAAGCTTTTTCATTTAGAGAACTATGTGCTGCAACTCAAAACTTTCACCCTTCCAATGTGATTGGTGAAGGAGGCTTTGGTAGGGTTTACAAAGGATACCTTAAAAGCACAGATCAAGTTGTTGCTGTGAAGCAACTTGACAGGAATGGATTTCAAGGGAATAGGGAATTTTTTGTTGAGGTTTTGGTTTTGAGTCTTTTGAAACACCCTAACCTTGTCAACTTGGTAGGGTATTGTGCTGAAGGTGAACAAAGGATTTTGGTGTATGAATACATGGTTAATGGTTCTTTAGAGGATCATTTACTTGACATCGATCCAGATAGAACACCATTAGATTGGCAAACTAGAATAAAAATTGCAGAAGGTGCAGCGAAAGGACTCGAATACTTGCACGAAATAGCAAATCCTCCGGTAATATACCGTGATTTTAAAGCATCAAATATTCTTTTAGACGAAAATTTCAATCCAAAGCTATCTGATTTTGGACTCGCAAAAGTTGGTATACTTGGTGATGAAATGGCACAAGTATCCACAAGGGTCATGGGAACCTATGGCTATTGCGCACCCGAATATGCATCCACAGGACAATTGACTATAAAATCAGATGTTTATAGTTTTGGAGTTGTGTTCTTGGAAATGATCACAGGAAGAAGAGTGATTGATAATTCGCGAAAAACAGAGGAAGCAAACTTAGTCCTTTGGGCACAACCACTTCTAAGAGACAGAAGAAAATTTGTACAAATAGCAGATCCATTGCTAGAAAATAAATACCCCATAAAGGGTTTGTACCAAGCTCTAGCAATAGCAGCAATGTGTCTTCAAGAGGAAGCTGAAACAAGGCCATGGATCAGTGATGTGGTTACTGCTCTTTCCTTTTTAGCAACCAAGAAGGTGGACGGAGATGCTTCCTTAAACGACAATTGTACTCAAGGTGGCGATTTTAATGGAGACAACAATTCGAATGACGACGAAAATAGCGACGATGGCAATAATAATAAGAATAAAATTTATGACGGATACGGAGACAACGATAAAGATAAAGATATTAATAATAATATTGACAATGACAACAACGATGATAATGATGATGTTAAGGAAAATAAAGGATAG	1296	0.3796	MSCFAWCNTSDPRIKRSLRRSIGDYHGGKTLAAFANMSFKTDSGKRKFIEEIARLGKGNITSKAFSFRELCAATQNFHPSNVIGEGGFGRVYKGYLKSTDQVVAVKQLDRNGFQGNREFFVEVLVLSLLKHPNLVNLVGYCAEGEQRILVYEYMVNGSLEDHLLDIDPDRTPLDWQTRIKIAEGAAKGLEYLHEIANPPVIYRDFKASNILLDENFNPKLSDFGLAKVGILGDEMAQVSTRVMGTYGYCAPEYASTGQLTIKSDVYSFGVVFLEMITGRRVIDNSRKTEEANLVLWAQPLLRDRRKFVQIADPLLENKYPIKGLYQALAIAAMCLQEEAETRPWISDVVTALSFLATKKVDGDASLNDNCTQGGDFNGDNNSNDDENSDDGNNNKNKIYDGYGDNDKDKDINNNIDNDNNDDNDDVKENKG	431

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst26234487g00355	431	FunFam	probable serine/threonine-protein kinase RLCKVII	40	153	-	-
	Arst26234487g00355	431	ProSitePatterns	Protein kinases ATP-binding region signature.	83	106	IPR017441	GO:0005524
	Arst26234487g00355	431	ProSiteProfiles	Protein kinase domain profile.	77	355	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst26234487g00355	431	PANTHER	OS07G0668900 PROTEIN	49	362	-	-
	Arst26234487g00355	431	MobiDBLite	consensus disorder prediction	400	416	-	-
	Arst26234487g00355	431	Gene3D	Transferase(Phosphotransferase) domain 1	154	373	-	-
	Arst26234487g00355	431	CDD	STKc_IRAK	83	352	-	-
	Arst26234487g00355	431	MobiDBLite	consensus disorder prediction	371	431	-	-
	Arst26234487g00355	431	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	200	212	IPR008271	GO:0004672\|GO:0006468
	Arst26234487g00355	431	SUPERFAMILY	Protein kinase-like (PK-like)	63	357	IPR011009	-
	Arst26234487g00355	431	Gene3D	Phosphorylase Kinase; domain 1	33	153	-	-
	Arst26234487g00355	431	Pfam	Protein kinase domain	78	349	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst26234487g00355	431	FunFam	Serine/threonine-protein kinase PBS1	154	370	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst26234487g00355	59	366	Glycoside Hydrolase	AT3G07070	68.506	6.58e-153	437

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-VIIa-1	Arst26234487g00355		Pkinase	1.4e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst26234487g00355	-		-	gmx:100790474	575.859