Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst26234487g00306 ATGGGAGACAGAGAGAATTTCGAGGTAGATAGAGACCGGGATCGCGTGAATTATTCGACTAGTATGGCTTCGGATTGGAGGTTTGGTGTTGGGAACTTTGCAAATTCAATGGTGGATTCGTATGTTACAAACTTTTGGGACCACCCCAATTCCCAGAACCTGGGATTTTGTGACATTAATGGGGGCTCTTCGAACATGAACGTGATTGGAAAAGATGGATTCGGCTACGGTAGAGGCAGTCATGATCATAGGACACTAGAAATGGGTTGGAACCATGCTAGTTCTGTGTTGAAGGGTGATAACAATGCTTTCTTGCCTAATGGACCAGCAATGCTTCCTCAGAGTTTATCTCAGTTTCCGAGTGATTCCGGATTCATCGAGAGGGCTGCGAGACTCTCGTGCTTTGGCGCTGGGAATTCCGTGGACATGGTGAACTCATTTGGGATTCCTCAATCCATGAACCTTTATGCTAGGATTGGGGGAACAATGCAGGGAACAGGGGATGCTCTTTTAGGACATGGATTAAGATCAGCAGCACTCGGAGGACAATCTCATAAAAGTGATCCGAATGTAGTTGAAGATGCGAAAGATGATAAAGAAATGACTCTCCAGGATGATAAAAGAAGTGAAAATCTTGCAGTGTCTCATGATGAAGGGAAACAAGCTCTTGGTGGTTCTGCTAATGAATCAGATAGAGCCGAATCGAGTGGCCGAGATGATTCCCCAATGTTGGAGTGTACAAGTGGGGAGCCTTCGAATAAGGGACTAAGCTCAAAGAAAAGGAAAAGAATTGGACTAGATGCCGATAAAGATAAAGTCGATGGAAGTCCTGAACAACCTGGTGCAGCCGTGAAGGAGAATTCCGGGAGTCGACAGCAAAAGGGGGAGCAACAACCAACTCCATCAACCAAGGGGTCCGGGAAGAATGCCAAGCAGGGTTCTCAAGCATCTGATTCACCTAAGGAGGAGTACATACATGTTAGGGCTCGCCGGGGTCAAGCAACAAATAGCCACAGCCTTGCAGAGAGAGTAAGGAGGGAAAAGATCAGCGAGCGTATGAAGTTTCTTCAAGACCTTGTACCTGGATGCAGCAAGGTCACGGGAAAGGCGGTGATGCTAGACGAAATTATAAACTATGTACAGTCTCTTCAAAGACAGGTTGAGTTTTTGTCAATGAAACTTGCCACGGTAAATCCGCGGATGGATTTTAATATTGAGGGATTGCTTGCTAAAGAAGTAAGTCTCTTGATTCTTCAGCAACGGGCCGGTACTTCTTCCGCGCATGGGTTTCCTCCAGAATTGTCCATGGCTTTTCCGCCATTACATCCATCTCGACCAGGACTTATTCATTCGACTCTTCCTAGCATGGCAAATTCATCGGATATACTTCGGCGGACGCTTCAACCAAATTTGGCGCACTTGAGCGGAGGATTCAAGGACCCAAATCAGCTTCCTGAAGTCTGGGATGACGAGCTTCACAACGTTGTACAGATGACATTTCCGACATCTGCCCCTCCGAGTTGCCAAGACCTGGATGGTTCTGCGCCTTCGGGTCAAACAAAAACTGAACCTTGA 1575 0.4679 MGDRENFEVDRDRDRVNYSTSMASDWRFGVGNFANSMVDSYVTNFWDHPNSQNLGFCDINGGSSNMNVIGKDGFGYGRGSHDHRTLEMGWNHASSVLKGDNNAFLPNGPAMLPQSLSQFPSDSGFIERAARLSCFGAGNSVDMVNSFGIPQSMNLYARIGGTMQGTGDALLGHGLRSAALGGQSHKSDPNVVEDAKDDKEMTLQDDKRSENLAVSHDEGKQALGGSANESDRAESSGRDDSPMLECTSGEPSNKGLSSKKRKRIGLDADKDKVDGSPEQPGAAVKENSGSRQQKGEQQPTPSTKGSGKNAKQGSQASDSPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDFNIEGLLAKEVSLLILQQRAGTSSAHGFPPELSMAFPPLHPSRPGLIHSTLPSMANSSDILRRTLQPNLAHLSGGFKDPNQLPEVWDDELHNVVQMTFPTSAPPSCQDLDGSAPSGQTKTEP 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst26234487g00306 524 CDD bHLH_AtBPE_like 323 408 - -
Arst26234487g00306 524 Gene3D - 330 403 IPR036638 GO:0046983
Arst26234487g00306 524 MobiDBLite consensus disorder prediction 189 215 - -
Arst26234487g00306 524 MobiDBLite consensus disorder prediction 500 524 - -
Arst26234487g00306 524 SMART finulus 339 389 IPR011598 GO:0046983
Arst26234487g00306 524 MobiDBLite consensus disorder prediction 180 322 - -
Arst26234487g00306 524 Pfam Helix-loop-helix DNA-binding domain 336 384 IPR011598 GO:0046983
Arst26234487g00306 524 MobiDBLite consensus disorder prediction 255 276 - -
Arst26234487g00306 524 MobiDBLite consensus disorder prediction 283 319 - -
Arst26234487g00306 524 FunFam Basic helix-loop-helix transcription factor 330 402 - -
Arst26234487g00306 524 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 333 383 IPR011598 GO:0046983
Arst26234487g00306 524 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 331 402 IPR036638 GO:0046983
Arst26234487g00306 524 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 226 435 IPR024097 GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst26234487g00306 37 500 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 46.285 8.14e-113 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst26234487g00306 HLH 6.7e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst26234487g00306 - - gmx:100783810 655.981