Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst26234487g00238 ATGAAGGTCATTGCTGCGTATTTGTTGGCCGTATTGGGAGGCAACACTGCCCCTTCAGCTGATGATATCAAGAACATCCTTTCCTCAGTTGGAGCTGAGGCTGATGATGGCATGATTGACTTGCTCTTGAGTCAAGTGGAGGGCAAAGATGTCACTGAGCTAATTGCATGTGGAAGGGAGAAGTTGGCCGCAGTGCCTTCTGGTGGCGGTGGAGTTGCTGTTGCCGCTGCTCCCGTCGCTGGAGGGGGTGGTGCTGCACCTGCTGCCGAAGCGAAGGAGGAAAAGAAAGTTGAAGAGAAGGAAGAGTCGGATGATGATATGGGTTTCAGCTTATTTGACTAG 342 0.5175 MKVIAAYLLAVLGGNTAPSADDIKNILSSVGAEADDGMIDLLLSQVEGKDVTELIACGREKLAAVPSGGGGVAVAAAPVAGGGGAAPAAEAKEEKKVEEKEESDDDMGFSLFD 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst26234487g00238 113 Gene3D - 1 58 IPR038716 -
Arst26234487g00238 113 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 1 113 IPR044076 GO:0002182|GO:0003735|GO:0022625
Arst26234487g00238 113 MobiDBLite consensus disorder prediction 81 113 - -
Arst26234487g00238 113 Hamap 50S ribosomal protein L12 [rpl12]. 2 113 IPR027534 GO:0003735|GO:0005840|GO:0006414
Arst26234487g00238 113 CDD Ribosomal_P2 1 113 IPR044076 GO:0002182|GO:0003735|GO:0022625
Arst26234487g00238 113 MobiDBLite consensus disorder prediction 89 103 - -
Arst26234487g00238 113 FunFam 60S acidic ribosomal protein P2 1 59 - -
Arst26234487g00238 113 Pfam 60s Acidic ribosomal protein 18 112 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst26234487g00238 1 113 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 68.142 2.90e-29 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst26234487g00238 K02943 - ini:109169288 127.102