Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst26234487g00231 ATGCTGAGAGTTTTGTCTCTCCCCAAGATGGGAATCTTCCTCCATTTGTTGTTGTCTTTGGGAATTTTGTTGGCTGAGATTCATGTCATTTCTTCTTATACTGATCCTCAAGATGCTGCTGTACTTAGATCTTTGAAGGATATATGGGTAAATACACCACCAAGTTGGGACAAATCAGATGACCCTTGTGGAGCACCATGGGAAGGAGTTACATGCAACAAATCAAGGGTTACTTCATTGGGACTTTCAACCATGGGCCTCAAAGGTAAACTAAGTGGGGACATTGGTGGACTAACAGAACTTAGATCTTTGGACTTGTCATTCAACAAAGGTTTAAAAGGTTCTCTGTCTCCAGAGATAGGAGACTTAAGGAATCTGAATATTCTCATCTTGGCTGGTTGTAGCTTCAGTGGCAGCATTCCAGATGCATTGGGGAATCTTTCACAGCTATCCTTCCTGGCCTTAAACTCAAACAACTTCACTGGAAAAATACCACCTTCATTGGGTAAACTCTCCAAACTTTATTGGTTAGACTTGGCAGATAATCAACTCACAGGGCCTATTCCAGTTTCAACCTCCACCACCCCTGGATTAGACCAACTTCTAAAGGCTAAGCACTTCCATTTCAATAAGAACCAGCTTTCAGGTACCATTTCCCCCAAACTTTTCAGCTCTGACATGGTGCTCATACATGTATTATTTGATGGAAATGATTTATCTGGTTCTATACCAGAAACATTAGGACTAGTTCAGACACTTGAGGTTCTCCGGCTTGATAGAAATTCCTTGACAGGAGAGGTTCCTACAAATCTCAATAACCTTACAAACATCAATGAATTGAACTTAGCACACAATAAATTGAAAGGTTCTTTGCCAGATTTAAGTCACATGGATACCCTCAACTATGTGGATCTTAGTAACAACTCCTTTGATCCCTCTGAACCTCCAATTTGGTTCTCATCTCTACCATCACTCACCACTCTTGTTATGGAGTTTGGATCTTTGGAAGGTCCTCTTCCATCAAAGCTCTTCAGCATTCCTCAAATTCAGCAAGTGAAACTGAGGAACAATGCATTGAACAATACATTAGACTTAGGTGACAACATTTGTCCACAATTGCAGCTTGTTGATCTTCAAGACAACCAGATTTCCTCAGTAATCCTCCGTTCGCAATACAAAAACACATTGATCCTTATAGGAAATCCAGTGTGCAGTGTTCTCTCAAACACAAACTACTGCCAACTTCAGCAGCAGCCTAAGCAACCTTACTCGACAAGCTTGGCGAATTGCGGAGGCAAATCTTGTCCGCCGGATCAAAAGCTTAGCCCTCAAAGCTGTGAATGTGCATACCCTTATGAAGGGATGTTGTACTTCAGAGGACCCTTGTTTAGAGAACTCTCAAATGTTAACATTTTCCATGAACTTGAGATGAGTTTGTGGGTGAAGTTGGACCTAACACCTGGCTCAGTTTCTTTGCAAAACCCTTTCTTCAATGGTGATGATTATCTTCAAGTGCAACTAGCTTTGTTTCCTCCATCAGGACAATATTTCAATAGGACTGAAGTTCAAAGAATTGGGTTTGATTTGACCAACCAAACTTACAAGCCTCCTAAGGAGTTTGGACCTTATTACTTCATTGCATTCCCTTATGCTTTCCCAGATTCTAACAAAGGAAACTCTCTTAGCACTGGTGCTATTATTGGTATAGCAGTAGGCTCATCAGTTCTGTTTCTGAGCCTCATAGCTTTAGCAGTATATGCAATCCTGCAAAAGAAGCGCGCGGAGCGAGCCATAGGATTAAGCAGACCTTTTGCATCTTGGGCACCAAGTGGAAAGGATAGTGGAGGTGCACCACAATTAAAGGGTGCAAGATGGTTCTCATATGATGAACTGAAAAAGAGCACTAGTAATTTCTCTGAAAGCAATGAGTTAGGATTTGGTGGTTATGGCAAGGTGTACAAAGGGGTGCTTCCTGATGGAAAAATCGTCGCGATCAAGCGAGCTCAGCAAGGATCAATGCAAGGAGGCCTAGAGTTCAAGACTGAAATTGAGTTGCTTTCAAGAGTTCATCACAAGAACCTCGTTGGACTCGTCGGATTTTGCTTCGAACAAGGAGAACAAATGTTGGTCTATGAATTCATGCCTAATGGAACACTTAGAGAGAGTTTGTCAGGAAGATCTGACATTCATCTTGATTGGAAGAGGAGACTTCGAATCGCCCTTGGCTCGGCCAGAGGACTCGCTTACCTTCATGAACTTGCCAACCCTCCAATTATCCACAGAGATGTGAAATCCACTAACATCTTACTAGATGAAAATTTGACAGCAAAGGTTGCAGATTTTGGACTATCTAAGTTAGTATCAGACAGTGAGAAAGGACATGTTTCTACTCAGGTTAAAGGAACATTGGGCTATTTGGACCCAGAATACTACATGACACAACAACTAACTGAAAAAAGTGATGTGTATAGCTTCGGAGTAGTTATGTTAGAGCTCATAAGTTCGAGGCAGCCCATTGAAAAGGGTAAGTACATTGTCCGGGAAGCTCGGACGGCGTTCAACCGGCACGACGAAGAACACTATGGAATGAGAGAACTAATGGATCCAACTGTGAGGAACACACCAAACCTCATTGGGTTTGGTAGGTTCCTAGAGTTGACTTTGCAATGTGTTGAGGAATCAGCCGTTGACCGTCCAACAATGAGTGAGGTTGTTAAGGCACTTGAGACAATCTTGCAAAATGATGGAATGAACACAAACTCAACCTCTGCTTCTTCATCTGCCACTGATTTTGGAGCCACCAAGGGTGGAGCAATGATGAAACATCCTTACATTGATACTTCAAATTTTGCAAAGAATAAGGATAATGTGAGTGACAACAGTGCCTTTGACTACAGTGGAGGATACACAATTTCAGCAAAAGTTGAACCAAAATAG 2937 0.4198 MLRVLSLPKMGIFLHLLLSLGILLAEIHVISSYTDPQDAAVLRSLKDIWVNTPPSWDKSDDPCGAPWEGVTCNKSRVTSLGLSTMGLKGKLSGDIGGLTELRSLDLSFNKGLKGSLSPEIGDLRNLNILILAGCSFSGSIPDALGNLSQLSFLALNSNNFTGKIPPSLGKLSKLYWLDLADNQLTGPIPVSTSTTPGLDQLLKAKHFHFNKNQLSGTISPKLFSSDMVLIHVLFDGNDLSGSIPETLGLVQTLEVLRLDRNSLTGEVPTNLNNLTNINELNLAHNKLKGSLPDLSHMDTLNYVDLSNNSFDPSEPPIWFSSLPSLTTLVMEFGSLEGPLPSKLFSIPQIQQVKLRNNALNNTLDLGDNICPQLQLVDLQDNQISSVILRSQYKNTLILIGNPVCSVLSNTNYCQLQQQPKQPYSTSLANCGGKSCPPDQKLSPQSCECAYPYEGMLYFRGPLFRELSNVNIFHELEMSLWVKLDLTPGSVSLQNPFFNGDDYLQVQLALFPPSGQYFNRTEVQRIGFDLTNQTYKPPKEFGPYYFIAFPYAFPDSNKGNSLSTGAIIGIAVGSSVLFLSLIALAVYAILQKKRAERAIGLSRPFASWAPSGKDSGGAPQLKGARWFSYDELKKSTSNFSESNELGFGGYGKVYKGVLPDGKIVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYEFMPNGTLRESLSGRSDIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSEKGHVSTQVKGTLGYLDPEYYMTQQLTEKSDVYSFGVVMLELISSRQPIEKGKYIVREARTAFNRHDEEHYGMRELMDPTVRNTPNLIGFGRFLELTLQCVEESAVDRPTMSEVVKALETILQNDGMNTNSTSASSSATDFGATKGGAMMKHPYIDTSNFAKNKDNVSDNSAFDYSGGYTISAKVEPK 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst26234487g00231 978 ProSitePatterns Serine/Threonine protein kinases active-site signature. 758 770 IPR008271 GO:0004672|GO:0006468
Arst26234487g00231 978 FunFam Predicted protein 196 416 - -
Arst26234487g00231 978 CDD STKc_IRAK 644 911 - -
Arst26234487g00231 978 Gene3D Phosphorylase Kinase; domain 1 612 713 - -
Arst26234487g00231 978 FunFam Leucine-rich repeat family protein 37 193 - -
Arst26234487g00231 978 SUPERFAMILY Protein kinase-like (PK-like) 623 919 IPR011009 -
Arst26234487g00231 978 ProSiteProfiles Protein kinase domain profile. 638 912 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst26234487g00231 978 Gene3D Ribonuclease Inhibitor 35 228 IPR032675 -
Arst26234487g00231 978 ProSitePatterns Protein kinases ATP-binding region signature. 644 666 IPR017441 GO:0005524
Arst26234487g00231 978 Pfam Leucine rich repeat N-terminal domain 36 73 IPR013210 -
Arst26234487g00231 978 Gene3D Ribonuclease Inhibitor 229 294 IPR032675 -
Arst26234487g00231 978 FunFam Leucine-rich repeat protein kinase family protein 606 713 - -
Arst26234487g00231 978 SMART serkin_6 638 911 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst26234487g00231 978 PANTHER RECEPTOR-LIKE PROTEIN 55 43 911 - -
Arst26234487g00231 978 Gene3D Ribonuclease Inhibitor 295 439 IPR032675 -
Arst26234487g00231 978 Pfam Protein tyrosine and serine/threonine kinase 641 908 IPR001245 GO:0004672|GO:0006468
Arst26234487g00231 978 SUPERFAMILY L domain-like 45 415 - -
Arst26234487g00231 978 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 714 924 - -
Arst26234487g00231 978 Gene3D Transferase(Phosphotransferase) domain 1 714 933 - -
Arst26234487g00231 978 ProSiteProfiles Leucine-rich repeat profile. 276 298 IPR001611 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst26234487g00231 16 978 Receptor kinase-like Gene Family AT1G79620 71.932 0.0 1441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Arst26234487g00231 PK_Tyr_Ser-Thr 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst26234487g00231 - - gmx:100792249 1665.97