Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst26234487g00178 ATGGCGGTGACACCAGTTCTACTTCACGGGACTTTGGAGGTAACTATTGTTCATGAGGTCCGCCACAATAATCCCAACAAAACTCCCTCTATCTGGGTTCAGTTGATGATATACGTGGTGGGATGGCTGTTGGAGCTATTGGACTGGCTAGTTGAACGCAATAATACTAAACTGGATGCAAAAATTTATCTGGATGGATTCGAAGTGGGAAGCAGGCATATACAAGCCCCCATGGATCGTAGCTGGAGAGAGCATTTTTACTTTCATTGTGCTCAGATGGCGTCAAATATCAAATTCGCTATCAACGATGTTACAAGAGAGGTTTCCGTTCAGGATATCTTGCAAAATGATGGTCAAACATGTGAATGGGTCCTGCAATTGCAAGGGATTGTTGGGCCGGCAGGTTCAAGGACCCGCGTGGTGCTGAAATTTTTGGATGCTAGAAAACACAGCGAAGGGATCGGTTCAGACTTTCATGGAGTTCGTGGCACCCACTACCCACAGAAAAATGGATGCAAGGTTACTCTTTACCAAGATGCTCACATCCCAGCTGATTACGTCGATAAAATGAGCAAGGATGGACTCGTGAATTATGAGCCGAAGCGATGCTGGGAGGACATATTTGATGCAATCAAGAAAGCAGAGAAGTTCGTATACATTGCTGGCTGGTCTCTTTACACTGAAATAACCCTCTTAAGGGATCCAACAAGGAAGACAATGGAAGAGAGACAAACTACACTTGGAGAGCTGCTCAAGAGAAAGGCAGAGAACGGACAGGTCAAAGTTGTATTGCTCATTTCCGATGATCCAACTGCGGTTGCAGGGTATGGAGGAGTGATGGGTATTCGTAGCAAAGAGGCAAAGGCATATTTTAGAGACACTAATGTGCAGTGCGTTTGGTGTTCTCGTCATAATAGTCGCGTGCTTTATAGTCATCACCAGAAGATTGTGGTGGTGGACGATAGTGATATTGGAGGAGGAATAGTGAGTTTCATTGGGGGCATTGATCTCTGCCGTGGAAGATATGATACTCCAGACCATTCACTTTTTAGAACCTTGCAAAAGAATGATGCACATAACAAAGATTTTCATCAAGCCAGTTTTGTTGGTTCTAAAATCGAAAAGGGTGGTCCTAGGGAGCCGTGGCATGACGTGCACTGTCGCCTCGAAGGGCCTGCTGCTTGTTATGTTTATGACACCTTTGTGCAGAGATGTAAGAAGGAAGGTAAAGAGGACATCCTTGTTCCCATGAACCAGCTTCGAGATTTCTTCAATTCCCCATCCCATGGCCACCAAGATAATAATAATAATAATAAGGCGTGGAATGTTCAGGTATTCAGATCTATTGATGACAAAGCTGTTCTCGACTTCCCAAAGGCTCATCATAGAAACATTACCAAAGTTGGGCCCCGGATTTTTAGAGGCAAATATAAAATAATAGATCATAGCATTGAAGATGCCTATATTGAAGCTATTAGGCGAGCAAAGAATTTCATCTATATTGAGAATGAATACTTCATAGGAAGCGATTTCGGTTGGAGTAGCAGACACAAGAAATTTAATGCTTCGAATCTAATCCCAAAGGAGATTTCACTCAAAATTGTTAGCAAGATTAAAGCCAAGGAGAAGTTCGCTGTGTATGTTGTGATTCCAATGTGGCCGGAGGGTGACCCTCATGGTGACGGTTTTGTTAGGGGTGACTTTTCTACAGTCCAGGACATGTTGCTTTTGCAGAGGAAGACAATAGAAATGATGTACAAGGACATTGTTGAAGCACTCAAACAAGAGAAAATTAAGGAAGATCCTCAGAGATATTTGTCATTCTTCTGCCTTGGGAATCGAGAGGTCAGAAAACATGGTGAATATCAACCTCAACGAACGCCACATAGGGATTTGCATTACATGAACGCTCAGACGAGTAGGCGATTCATGATTTATGTACATTCCAAGATGATGATAGTTGATGATGAATACATAATCATTGGATCTGCCAACATCAACCACAGATCAATGCAAGGTGGTAGAGACACTGAGATTGCCATGGGAGCTTATCAACCCTCCTATCTGGCTAGCGGGCAAAATGGTGCAACGGGGCAGATCCACGGTTTCCGCATGTCCTTGTGGTTGGAGCATCTTGGAATATGTGAAAGAACCTTCATCAACCCTGAAAGTAAAGAATGTGTTAGTAGGGTGAACCAACTTGCTGAAAAGTATTGGAAATCGTATTCTGCAGGATCATTTGATACTGACCTTCCAGGCCATCTGCTCCGCTATCCTATTCAAATTTCTAACGATGGAACTGTGCAAGAACTTCCAGGATTCCAGTACTTCCCAGACACCTTTGCCACTATTCTAGGGAAACAAAGTCCTCTCATGCACAACACGTAA 2388 0.4343 MAVTPVLLHGTLEVTIVHEVRHNNPNKTPSIWVQLMIYVVGWLLELLDWLVERNNTKLDAKIYLDGFEVGSRHIQAPMDRSWREHFYFHCAQMASNIKFAINDVTREVSVQDILQNDGQTCEWVLQLQGIVGPAGSRTRVVLKFLDARKHSEGIGSDFHGVRGTHYPQKNGCKVTLYQDAHIPADYVDKMSKDGLVNYEPKRCWEDIFDAIKKAEKFVYIAGWSLYTEITLLRDPTRKTMEERQTTLGELLKRKAENGQVKVVLLISDDPTAVAGYGGVMGIRSKEAKAYFRDTNVQCVWCSRHNSRVLYSHHQKIVVVDDSDIGGGIVSFIGGIDLCRGRYDTPDHSLFRTLQKNDAHNKDFHQASFVGSKIEKGGPREPWHDVHCRLEGPAACYVYDTFVQRCKKEGKEDILVPMNQLRDFFNSPSHGHQDNNNNNKAWNVQVFRSIDDKAVLDFPKAHHRNITKVGPRIFRGKYKIIDHSIEDAYIEAIRRAKNFIYIENEYFIGSDFGWSSRHKKFNASNLIPKEISLKIVSKIKAKEKFAVYVVIPMWPEGDPHGDGFVRGDFSTVQDMLLLQRKTIEMMYKDIVEALKQEKIKEDPQRYLSFFCLGNREVRKHGEYQPQRTPHRDLHYMNAQTSRRFMIYVHSKMMIVDDEYIIIGSANINHRSMQGGRDTEIAMGAYQPSYLASGQNGATGQIHGFRMSLWLEHLGICERTFINPESKECVSRVNQLAEKYWKSYSAGSFDTDLPGHLLRYPIQISNDGTVQELPGFQYFPDTFATILGKQSPLMHNT 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst26234487g00178 795 Gene3D Endonuclease Chain A 434 691 - -
Arst26234487g00178 795 Pfam PLD-like domain 489 678 IPR025202 -
Arst26234487g00178 795 SUPERFAMILY Phospholipase D/nuclease 198 416 - -
Arst26234487g00178 795 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 643 670 IPR001736 GO:0003824
Arst26234487g00178 795 SMART pld_4 643 670 IPR001736 GO:0003824
Arst26234487g00178 795 SMART pld_4 308 341 IPR001736 GO:0003824
Arst26234487g00178 795 SUPERFAMILY Phospholipase D/nuclease 482 727 - -
Arst26234487g00178 795 Gene3D Endonuclease Chain A 187 433 - -
Arst26234487g00178 795 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 308 341 IPR001736 GO:0003824
Arst26234487g00178 795 PIRSF PLD_plant 1 795 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Arst26234487g00178 795 Pfam Phospholipase D C terminal 717 787 IPR024632 -
Arst26234487g00178 795 PANTHER PHOSPHOLIPASE D 6 787 IPR015679 -
Arst26234487g00178 795 Pfam Phospholipase D Active site motif 310 341 IPR001736 GO:0003824
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst26234487g00178 7 792 Phospholipase D Gene Family (Wang group) AT1G52570 49.333 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst26234487g00178 K01115 - rvl:131335420 719.924