LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst26234487g00163	ATGGTTGATGGATATAGAAGTATGGTGGAGAACCCATCACCAATGAGAAACGCAACAAATCACATGATGCTGGGATTTCTTGCTGGAATTTCGACAGTTATGTTAGTTGCTGCCATATTGTTCTGCCTCTTTGGAACAAAGCTCATTGCACTTTTCAAACAACATAGGACTTTGAAAGGTAAAGAGTACAACAGCTTCAAAGATGAAACAATGCCTCTAAGGCGTTTTACCTTTGATGAAATAGAGAGAGCTACCAAGAACTTTAGCCAAGAATTCTTACTTGGTTCTGGTGCATTTGGAAATGTTTACAAAGGAAATTTTGAATTAGAAGGAACTTTAGCCATTAAGAGAGCTCACGGCGAATCCTTCTTAAGCGTCGATGAATTCCGAAATGTTAGGCTCCTTGCAACTGTAAAGCACAGAAATCTTATTGGTCTAGTGGGGTATTGTGAAGAACCAGAAAGATTTGGGGCAAGAATTCTGGTATATGAATGTGTACCAAATGGCTCTCTGCTTGAATATATGATTGGAAACAAGAATAGCTTGACTTGGAAGCAAAGAGTGAACATAGCAATAGGAGCAGCTAGAGGCATAGCTTATTTACATGAAGGAATAAAGCCGAGTATAATTCATCGTGATCTCAAACCAAGTAACATCCTATTAGGTGAAGGTTTCGAGGCTAAGGTCTCGGATTTCGGGTTGGTGAAATCCGGCCCTATTGAGGACCAATCACATGTGAGTAGCCAAATCAAAGGGACACCAGGGTATCTTGATCCGGCATACTGTTCAAGCTTTCACTTGACAAAATTCACTGATGTTTATAGCTTTGGTGTCATACTTCTTCAACTTGTTTCAGCTAGACCTGCTGTTGATACAAATGAGGTACAAAGCAAGCAACATATAATTGATTGGGCAAGCCCTAGCTTAGAGAAGGGTAATGTTGAAGAAATCATAGATGCAAACTTGCTATGTCAAAGTGAGCCATGCAATATGAGAGTTATGCTGAAGATGGGTCAACTTGCTTTAAGATGTGTGGTTCAAGAACCAAAAAGTAGACCTACAATGATTCAAGTGTGTCAAGAACTAGAACAAGCACTATACTCTGAAGATACCTTCAACAACAAGCAACATTCTTCAAAGGGTTTCCCATCAATTGGATTGTCTCAGCAATCATCAGTGGAAAAGAATGATAGCTTTGTGAGCATAGATGGTGTTGGACTTCAGAAATTCCATATTGATATGGATAGCTTATCATTTCAGAGTACAAGGTTAATGTGCCTAGAAAATAATAGTATAAGTATTGACATTGATAACAACAACTTGAAGAGAATTCAAGAGGATGGGGACATATAA	1353	0.388	MVDGYRSMVENPSPMRNATNHMMLGFLAGISTVMLVAAILFCLFGTKLIALFKQHRTLKGKEYNSFKDETMPLRRFTFDEIERATKNFSQEFLLGSGAFGNVYKGNFELEGTLAIKRAHGESFLSVDEFRNVRLLATVKHRNLIGLVGYCEEPERFGARILVYECVPNGSLLEYMIGNKNSLTWKQRVNIAIGAARGIAYLHEGIKPSIIHRDLKPSNILLGEGFEAKVSDFGLVKSGPIEDQSHVSSQIKGTPGYLDPAYCSSFHLTKFTDVYSFGVILLQLVSARPAVDTNEVQSKQHIIDWASPSLEKGNVEEIIDANLLCQSEPCNMRVMLKMGQLALRCVVQEPKSRPTMIQVCQELEQALYSEDTFNNKQHSSKGFPSIGLSQQSSVEKNDSFVSIDGVGLQKFHIDMDSLSFQSTRLMCLENNSISIDIDNNNLKRIQEDGDI	450

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst26234487g00163	450	PANTHER	OS01G0750732 PROTEIN	69	379	-	-
	Arst26234487g00163	450	FunFam	probable LRR receptor-like serine/threonine-protein kinase RKF3	166	369	-	-
	Arst26234487g00163	450	FunFam	Putative LRR receptor-like serine/threonine-protein kinase	58	165	-	-
	Arst26234487g00163	450	Gene3D	Phosphorylase Kinase; domain 1	49	164	-	-
	Arst26234487g00163	450	ProSiteProfiles	Protein kinase domain profile.	88	367	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst26234487g00163	450	SUPERFAMILY	Protein kinase-like (PK-like)	65	363	IPR011009	-
	Arst26234487g00163	450	ProSitePatterns	Protein kinases ATP-binding region signature.	94	116	IPR017441	GO:0005524
	Arst26234487g00163	450	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	209	221	IPR008271	GO:0004672\|GO:0006468
	Arst26234487g00163	450	Pfam	Protein kinase domain	91	360	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst26234487g00163	450	Gene3D	Transferase(Phosphotransferase) domain 1	166	384	-	-
	Arst26234487g00163	450	SMART	serkin_6	88	366	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst26234487g00163	64	400	Receptor kinase-like Gene Family	AT1G30570	41.765	9.97e-74	246

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-I-1	Arst26234487g00163		Pkinase	6.8e-36	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst26234487g00163	-		-	var:108328541	619.387