Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst26234487g00162 ATGGTTGATGGATATAGAAGTATGGTGGAGAACCCATCACCAATGAGAAACGCAACAAATCACATGATGCTGGGATTTCTTGCTGGAATTTCGACAGTTATGTTAGTTGCTGCCATATTGTTCTGCCTCTTTGGAACAAAGCTCATTGCACTTTTCAAACAACATAGGACTTTGAAAGGTAAAGAGTACAACAGCTTCAAAGATGAAACAATGCCTCTAAGGCGTTTTACCTTTGATGAAATAGAGAGAGCTACCAAGAACTTTAGCCAAGAATTCTTACTTGGTTCTGGTGCATTTGGAAATGTTTACAAAGGAAATTTTGAATTAGAAGGAACTTTAGCCATTAAGAGAGCTCACGGCGAATCCTTCTTAAGCGTCGATGAATTCCGAAATGAAGTTAGGCTCCTTGCAACTGTAAAGCACAGAAATCTTATTGGTCTAGTGGGGTATTGTGAAGAACCAGAAAGATTTGGGGCAAGAATTCTGGTATATGAATGTGTACCAAATGGCTCTCTGCTTGAATATATGATTGGAAACAAGAATAGCTTGACTTGGAAGCAAAGAGTGAACATAGCAATAGGAGCAGCTAGAGGCATAGCTTATTTACATGAAGGAATAAAGCCGAGTATAATTCATCGTGATCTCAAACCAAGTAACATCCTATTAGGTGAAGGTTTCGAGGCTAAGGTCTCGGATTTCGGGTTGGTGAAATCCGGCCCTATTGAGGACCAATCACATGTGAGTAGCCAAATCAAAGGGACACCAGGGTATCTTGATCCGGCATACTGTTCAAGCTTTCACTTGACAAAATTCACTGATGTTTATAGCTTTGGTGTCATACTTCTTCAACTTGTTTCAGCTAGACCTGCTGTTGATACAAATGAGGTACAAAGCAAGCAACATATAATTGATTGGGCAAGCCCTAGCTTAGAGAAGGGTAATGTTGAAGAAATCATAGATGCAAACTTGCTATGTCAAAGTGAGCCATGCAATATGAGAGTTATGCTGAAGATGGGTCAACTTGCTTTAAGATGTGTGGTTCAAGAACCAAAAAGTAGACCTACAATGATTCAAGTGTGTCAAGAACTAGAACAAGCACTATACTCTGAAGATACCTTCAACAACAAGCAACATTCTTCAAAGGGTTTCCCATCAATTGGATTGTCTCAGCAATCATCAGTGGAAAAGAATGATAGCTTTGTGAGCATAGATGGTGTTGGACTTCAGAAATTCCATATTGATATGGATAGCTTATCATTTCAGAGTACAAGGTTAATGTGCCTAGAAAATAATAGTATAAGTATTGACATTGATAACAACAACTTGAAGAGAATTCAAGAGGATGGGGACATATAA 1356 0.3879 MVDGYRSMVENPSPMRNATNHMMLGFLAGISTVMLVAAILFCLFGTKLIALFKQHRTLKGKEYNSFKDETMPLRRFTFDEIERATKNFSQEFLLGSGAFGNVYKGNFELEGTLAIKRAHGESFLSVDEFRNEVRLLATVKHRNLIGLVGYCEEPERFGARILVYECVPNGSLLEYMIGNKNSLTWKQRVNIAIGAARGIAYLHEGIKPSIIHRDLKPSNILLGEGFEAKVSDFGLVKSGPIEDQSHVSSQIKGTPGYLDPAYCSSFHLTKFTDVYSFGVILLQLVSARPAVDTNEVQSKQHIIDWASPSLEKGNVEEIIDANLLCQSEPCNMRVMLKMGQLALRCVVQEPKSRPTMIQVCQELEQALYSEDTFNNKQHSSKGFPSIGLSQQSSVEKNDSFVSIDGVGLQKFHIDMDSLSFQSTRLMCLENNSISIDIDNNNLKRIQEDGDI 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst26234487g00162 451 Gene3D Transferase(Phosphotransferase) domain 1 167 385 - -
Arst26234487g00162 451 SUPERFAMILY Protein kinase-like (PK-like) 65 364 IPR011009 -
Arst26234487g00162 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Arst26234487g00162 451 ProSiteProfiles Protein kinase domain profile. 88 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst26234487g00162 451 Pfam Protein kinase domain 91 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst26234487g00162 451 CDD STKc_IRAK 94 365 - -
Arst26234487g00162 451 PANTHER OS01G0750732 PROTEIN 69 380 - -
Arst26234487g00162 451 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 167 370 - -
Arst26234487g00162 451 SMART serkin_6 88 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst26234487g00162 451 ProSitePatterns Protein kinases ATP-binding region signature. 94 116 IPR017441 GO:0005524
Arst26234487g00162 451 Gene3D Phosphorylase Kinase; domain 1 49 165 - -
Arst26234487g00162 451 FunFam Putative LRR receptor-like serine/threonine-protein kinase 58 166 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst26234487g00162 64 401 Receptor kinase-like Gene Family AT1G30570 42.059 4.53e-76 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Arst26234487g00162 Pkinase 6e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst26234487g00162 - - gmx:106794267 624.78