Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst26234487g00159 ATGGAGTTTGTGACAGAAAATTCAAGTCCTTTGTTGGGTTCCTTTGTGGAGAGGGTGAACATGGTTGGTAGCCATGCCCTCTCTGCCATTGTTAGGAACATCTTCTCTGCCATCTTCACCTTCTGCTTTGCATTTGTGGGGACTTTGTTGGGGGCTATGACTGGAGCTTTGATAGGACAAGAGACAGAGAGTGGATTCATTAGAGGAGCTGCCATTGGAGCCATTTCAGGAGCTGTTTTTTCCATTGAAGTTTTTGAATCTTCTCTTGTTCTTTGGCAATCTGATGAATCTGGAATTGGCTGCTTCTTATACTTGCTTGATGTAATTGCAAGCCTATTAAGTGGAAGACTTGTGAGAGAAAGGATTGGTCCAGCAATGTTAAGTGCTGTCCAAAGTCAGATGGGTGCTGTTGAGATTAACTTTGATGATGTTCAAAACATCTTTGACACTGGTGGTGCAAAAGGCTTATCAAAAGATTCAGTTGAAAAGATCTCAAAGATCATAATTACAAGTGACAACAATGTTGATGCTTCTGGTGAAAAGGTTTCTTGCTCAGTTTGCCTTCAGGACTTTCAAATTGGAGAAACAGTTAGAAGCTTGCCCCATTGCCATCACATGTTTCACCAACCTTGCATTGACAAGTGGCTCATAAGGCATGGATCTTGCCCTCTATGTAGAAGGGATCTGTAA 690 0.4203 MEFVTENSSPLLGSFVERVNMVGSHALSAIVRNIFSAIFTFCFAFVGTLLGAMTGALIGQETESGFIRGAAIGAISGAVFSIEVFESSLVLWQSDESGIGCFLYLLDVIASLLSGRLVRERIGPAMLSAVQSQMGAVEINFDDVQNIFDTGGAKGLSKDSVEKISKIIITSDNNVDASGEKVSCSVCLQDFQIGETVRSLPHCHHMFHQPCIDKWLIRHGSCPLCRRDL 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst26234487g00159 229 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 14 228 IPR044523 -
Arst26234487g00159 229 ProSiteProfiles Zinc finger RING-type profile. 184 226 IPR001841 -
Arst26234487g00159 229 SUPERFAMILY RING/U-box 172 229 - -
Arst26234487g00159 229 SMART ring_2 184 225 IPR001841 -
Arst26234487g00159 229 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 144 229 IPR013083 -
Arst26234487g00159 229 FunFam NEP1-interacting protein-like 1 144 229 - -
Arst26234487g00159 229 Pfam Ring finger domain 183 226 IPR001841 -
Arst26234487g00159 229 CDD RING-H2_NIPL1-like 183 226 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst26234487g00159 9 229 C3H Transcription Factor Family AT5G66070 74.661 2.90e-115 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst26234487g00159 - - qsa:O6P43_033568 380.563