Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst26234487g00121 ATGTTTCTCAATAAAATGAAGCTTCTTCTTTTCTCCTTTACCATAAACTTGCTCTGTTTTTTTCAATCTAACATAGCTTCTTTTTCTCTAGCAATAGAAAACAACAACAATAATAATGATGAGCTTAACGCACTGCTCAAGTTCAAGGAAGCTATATCCAATGACCCTCATAAAATCTTAACCTCTTGGAATAGCTCCAACCACTTTTGCAATTGGCATGGAATCACATGTAGCAAAAGAGAGCAAAGAGTTTTGGAGTTGAACTTAGAAGGATATCAATTGCAAGGGTTCATGTCACCCCATATTGGCAATCTCTCTTCTTTACAAACTCTCAACCTTCAAAACAATAATTTCTACGGCGGGATTCCGCCAGAACTTGGTCATCTGTCTAGGCTGCGACTACTCTTTCTCGCCAATAACTCGCTGGCCGGAGAAATTCCAACCAACTTAACAAGTTGTTTGGAACTTAGGCGTATATATTTACAAGGGAACAATCTTAGTGGAAAAATACCAATGGAGATTGGTTCTCTTAAAGAACTTCAATGGTTATGGTTGGCCAAGAATCATTTATCAGGGAAGATACCATATTCCATATGGAATCTTTCATCCCTTCTTGTTCTTTCTCTTTCATATAACAACTTGGAGGGAAAGATACCACAAAACATTGGCAACTTGAAACATTTGCAAATTCTTGGTATGGTTTCCAACAAATTATGTGGTATGCTTCCTTATTCTCTTTACAATGTGTCATCTCTTACTTACATATCGGCCACGAACAACCACTTTAACGGCTCTCTTCCGGCCGACATGTTCTTCTCCCTCCCTAGGCTCCAACTTTTTGAAATTGGAAGCAACCAAATGTCAGGTTCAATCCCTGTTTCAATCACCAATGCAACCTCTCTTAGAAGATTTGATGTCACTAATAATAGTTTTTTAGGGAAAGTTCCAAGTCTAGCAAAGTTGCATGATCTTTGGTGGTTGAATTTTGGTTCCAACTATCTAGGAAGTTATTCACTTAAGGACTCTGAGTTCTTAGAATCTTTGCAAAATTGTAGTAAGTTGGAAATATTGGACATATCCGCCAACAATTTCGCTGGCCGTTTGCCAGAAAATATAGCCAACTTTTCCGACCGGCTCAGAGAAATATACCTTAGTGATAACCTATTGTTTGGAGAAATTCCTACCACTTTAGGAGATCACATTAATTTAGATGTCCTTACCATGGAACTCAACTTTTTTATAGGATCAATTCCAACAACATTTGTAAAGTTTCAAACAATGAAAAGATTGGATTTGAGTTATAACAAAATCTCAGGACAAATTCCACCCTTTATAGGGAACCTTAGCCAATTGCTTGAGCTAAGAATCTCAAACAATATGCTAAGAGGAAACATTCCTCCAAGTATAGGAAATTGCAAAAGTTTAGAAATTCTAGACCTTGCAACTAACAATCTTAGTGGAGTCATACCCCCAGAAGTTATAGGTCTTTCTTCTTTGACAGTCCTACTAAACTTGTACGAAAACTCGTTGACCGGATACCTTCCTGGACAAGTAAGCCTGTTGAAATTTATTCGTCAGTTGGACGTCTCGAAAAATTATCTGTCTGGCGAAATTCCTGAGAATATTGGAGAGTTGGTAAACCTCGAGTACCTTAACTTACAAGGTAATTCATTCAATGGAACCATACCTTCATCTTTGGCTATGGTGAAGAGTCTCCAACATTTAGACCTATCAAGAAACAACTTGTCTGGATCGATTCCAACCGCGCTACAAGATCTATCTCTTCTAGAATACCTAAATGTTTCTTTCAACATGTTGGATGGTGAAGTTCCAAGAAAAGGTGTGTTTGGAAATTCAACTGCTATAACACTATTTGGTAATGTTAAGCTTTGTGGAGGAATCTCTGAGCTGAAGTTACCACCATGCCATGGTTCAAAACAACCAAGACATCATAGTTTCAAGGACATAGCAGTGATGATAGTTTCTATGGTTGCTTTTCCTGTTCTGTTGTGTTCTATGTTTGTTGCTTATATGATGAGGATAAGAAAGAATGAACCAATTTCAGATTCATCAGCATTAAATGACTTATTTGAAAAGGTGTCGTATCAAAGACTTCACCAAGCAACTAATGGTTTCTCAGCTAGCAACTTGATAGGGTCTGGAAATTTCGGCTTTGTTTATAAAGGCAATCTCGCCTCGACTAATAAAGTTGTAGCTATAAAGGTCTTAAACCTTCAAAAGAAAGGAGCTCGAGCGAGTTTCATGGCCGAATGCAATGCACTGAAACACATTAGCCATAGAAATTTGGTTAAGATTCTAACCTGTTGCTCGAGTACAGATCACAACGGCCGAGAATTCAAAGCTCTGGTGTTCAAATACATGGAAAATGGAAGCTTGGATAAATGGTTGCATCCAGATATTGAAAGATTTGAAGTGCCAAAAACCTTGATGAGTCTAAACCAAAGAATAAGGATTCTAATTGATGTTGCTTCAGCAATAAGTTATCTTCACTACGAATGCGCGCAGCCTATTGTTCATTGCGATTTAAAGCCGAGCAATATTCTTCTAGATGATAACATGGTTGCTCATGTTGGTGACTTTGGATCTGCAAGATTTCTGTCAAAAATCAATGACAAATCTTATAAGCAAAATATCATATCCAGAATAAATGGTACTATTGGTTATACTCCTCCAGAGTATGGAATGAGTTCAGAGGTGTCGAAACAAGGCGACACGTATAGCTTTGGGATTCTTGTTTTGGAAATGTTAACAGGAAGAAGACCTACTGAGGAAACTTTTCAACTTGGTCACAATCTCCATAGCTATGTAAGGATGGCATTTCCAGATAAACTCTTGCAGATTGTAGATCCAATTCTTCTGTCCATAGAAATAGAAGGAACAACAGCAAAGAAATGTTTGTATTCACTCTTTAGAATTGGACTTGCTTGTTCTGTGGAGTCACCAAAAGAAAGAATGAGCATCGAGTGTGTTAGCAGAGAACTAAACCTTATAAAGAATTCCTTATAA 3027 0.3759 MFLNKMKLLLFSFTINLLCFFQSNIASFSLAIENNNNNNDELNALLKFKEAISNDPHKILTSWNSSNHFCNWHGITCSKREQRVLELNLEGYQLQGFMSPHIGNLSSLQTLNLQNNNFYGGIPPELGHLSRLRLLFLANNSLAGEIPTNLTSCLELRRIYLQGNNLSGKIPMEIGSLKELQWLWLAKNHLSGKIPYSIWNLSSLLVLSLSYNNLEGKIPQNIGNLKHLQILGMVSNKLCGMLPYSLYNVSSLTYISATNNHFNGSLPADMFFSLPRLQLFEIGSNQMSGSIPVSITNATSLRRFDVTNNSFLGKVPSLAKLHDLWWLNFGSNYLGSYSLKDSEFLESLQNCSKLEILDISANNFAGRLPENIANFSDRLREIYLSDNLLFGEIPTTLGDHINLDVLTMELNFFIGSIPTTFVKFQTMKRLDLSYNKISGQIPPFIGNLSQLLELRISNNMLRGNIPPSIGNCKSLEILDLATNNLSGVIPPEVIGLSSLTVLLNLYENSLTGYLPGQVSLLKFIRQLDVSKNYLSGEIPENIGELVNLEYLNLQGNSFNGTIPSSLAMVKSLQHLDLSRNNLSGSIPTALQDLSLLEYLNVSFNMLDGEVPRKGVFGNSTAITLFGNVKLCGGISELKLPPCHGSKQPRHHSFKDIAVMIVSMVAFPVLLCSMFVAYMMRIRKNEPISDSSALNDLFEKVSYQRLHQATNGFSASNLIGSGNFGFVYKGNLASTNKVVAIKVLNLQKKGARASFMAECNALKHISHRNLVKILTCCSSTDHNGREFKALVFKYMENGSLDKWLHPDIERFEVPKTLMSLNQRIRILIDVASAISYLHYECAQPIVHCDLKPSNILLDDNMVAHVGDFGSARFLSKINDKSYKQNIISRINGTIGYTPPEYGMSSEVSKQGDTYSFGILVLEMLTGRRPTEETFQLGHNLHSYVRMAFPDKLLQIVDPILLSIEIEGTTAKKCLYSLFRIGLACSVESPKERMSIECVSRELNLIKNSL 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst26234487g00121 1008 ProSitePatterns Protein kinases ATP-binding region signature. 718 741 IPR017441 GO:0005524
Arst26234487g00121 1008 Coils Coil 32 52 - -
Arst26234487g00121 1008 SMART serkin_6 712 1004 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst26234487g00121 1008 Gene3D Transferase(Phosphotransferase) domain 1 794 1008 - -
Arst26234487g00121 1008 FunFam LRR receptor-like serine/threonine-protein kinase EFR 340 648 - -
Arst26234487g00121 1008 SUPERFAMILY L domain-like 39 334 - -
Arst26234487g00121 1008 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 38 200 - -
Arst26234487g00121 1008 PANTHER OS04G0122200 PROTEIN 223 1004 - -
Arst26234487g00121 1008 Pfam Protein kinase domain 714 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst26234487g00121 1008 FunFam LRR receptor-like serine/threonine-protein kinase EFR 683 793 - -
Arst26234487g00121 1008 SMART LRR_typ_2 545 568 IPR003591 -
Arst26234487g00121 1008 SMART LRR_typ_2 129 153 IPR003591 -
Arst26234487g00121 1008 SMART LRR_typ_2 593 618 IPR003591 -
Arst26234487g00121 1008 SMART LRR_typ_2 201 225 IPR003591 -
Arst26234487g00121 1008 SMART LRR_typ_2 569 592 IPR003591 -
Arst26234487g00121 1008 SMART LRR_typ_2 105 128 IPR003591 -
Arst26234487g00121 1008 SMART LRR_typ_2 448 472 IPR003591 -
Arst26234487g00121 1008 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 219 315 - -
Arst26234487g00121 1008 Pfam Leucine rich repeat N-terminal domain 38 78 IPR013210 -
Arst26234487g00121 1008 Gene3D Ribonuclease Inhibitor 225 340 IPR032675 -
Arst26234487g00121 1008 Pfam Leucine rich repeat 547 606 IPR001611 GO:0005515
Arst26234487g00121 1008 ProSitePatterns Serine/Threonine protein kinases active-site signature. 844 856 IPR008271 GO:0004672|GO:0006468
Arst26234487g00121 1008 ProSiteProfiles Leucine-rich repeat profile. 571 594 IPR001611 GO:0005515
Arst26234487g00121 1008 SUPERFAMILY L domain-like 378 632 - -
Arst26234487g00121 1008 ProSiteProfiles Protein kinase domain profile. 712 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst26234487g00121 1008 SUPERFAMILY Protein kinase-like (PK-like) 689 1001 IPR011009 -
Arst26234487g00121 1008 Gene3D Ribonuclease Inhibitor 40 153 IPR032675 -
Arst26234487g00121 1008 Gene3D Ribonuclease Inhibitor 154 224 IPR032675 -
Arst26234487g00121 1008 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 794 1008 - -
Arst26234487g00121 1008 Gene3D Phosphorylase Kinase; domain 1 673 793 - -
Arst26234487g00121 1008 Gene3D Ribonuclease Inhibitor 341 651 IPR032675 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst26234487g00121 44 1005 Receptor kinase-like Gene Family AT3G47570 44.559 0.0 787
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Arst26234487g00121 Pkinase 4.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst26234487g00121 - - ahf:112783139 1627.07