Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst26234487g00107 ATGGTGGTTGCTATCAAGAAATTGAACTCTGAAAGCACTCAAGGGTTTCAAGAGTGGCAGTCAGAAGTAAACTTCTTAGGAAGGCTTTCTCACCCGAACCTGGTAAAGCTATTAGGGTACTGTTGGGACGACGATGAGCTTCTACTTGTGTATGAGTTCATGCCAAAGGGGAGCTTGGAGAATCATCTTTTCAGAACAGGGAATCCTAACATAGAACCACTTTCATGGAACACCCGAATTAAGATAGCTATTGGCGCAGCAAGGGGCCTCGCTTTCTTGCACGCTTCCGAAAAACAAGTCATATACAGAGATTTCAAGGCTTCAAATATACTACTTGACGGGAATTACAACGCGAAAATATCGGATTTCGGCTTGGCTAAATTGGGCCCTGCTGTGGGAGCATCACATGTAACTACCAGAGTCATGGGCACATATGGCTATGCTGCTCCGGAGTACATTGCAACAGGTCACTTGTATGTGAAGAGTGATGTCTACGGCTTTGGCGTAGTTCTACTTGAAATGATGTCAGGCTTGCGCGCGCTCGATACAAAGCGGCCGACAGGGCAACAGAATCTGGTTGAATGGGTTAAGCCTAATCTCTCCAACAAGAGAAAGTTGAAAACCATAATGGATGCTAGGATTGATGGCCAATATTCACAAAAGGCGGCGCAGCAGGCGGCGCAACTCACTCTGAAATGCTTGGAACCGGACCCCAAAAACCGACCGTCGATGAAAGAAGTTGTGGAGGCATTGGAAGCCATAGAATCAATGCAAGATAAATCCAAGGAGTCCAAGAATAGAGGTTCTCATTCTTCTGCAGCCTCTAAGAGTCACCATCATTCAAGGCAAAGAGTTTCAAAAGCAAAAGTATGA 873 0.457 MVVAIKKLNSESTQGFQEWQSEVNFLGRLSHPNLVKLLGYCWDDDELLLVYEFMPKGSLENHLFRTGNPNIEPLSWNTRIKIAIGAARGLAFLHASEKQVIYRDFKASNILLDGNYNAKISDFGLAKLGPAVGASHVTTRVMGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEMMSGLRALDTKRPTGQQNLVEWVKPNLSNKRKLKTIMDARIDGQYSQKAAQQAAQLTLKCLEPDPKNRPSMKEVVEALEAIESMQDKSKESKNRGSHSSAASKSHHHSRQRVSKAKV 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst26234487g00107 290 SUPERFAMILY Protein kinase-like (PK-like) 2 252 IPR011009 -
Arst26234487g00107 290 Gene3D Transferase(Phosphotransferase) domain 1 55 280 - -
Arst26234487g00107 290 Gene3D Phosphorylase Kinase; domain 1 1 54 - -
Arst26234487g00107 290 ProSitePatterns Serine/Threonine protein kinases active-site signature. 100 112 IPR008271 GO:0004672|GO:0006468
Arst26234487g00107 290 Coils Coil 247 267 - -
Arst26234487g00107 290 Pfam Protein kinase domain 2 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst26234487g00107 290 FunFam Serine/threonine-protein kinase PBS1 54 270 - -
Arst26234487g00107 290 PANTHER OS01G0588500 PROTEIN-RELATED 2 255 - -
Arst26234487g00107 290 PIRSF ILK 1 270 - -
Arst26234487g00107 290 MobiDBLite consensus disorder prediction 272 290 - -
Arst26234487g00107 290 MobiDBLite consensus disorder prediction 253 269 - -
Arst26234487g00107 290 ProSiteProfiles Protein kinase domain profile. 1 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst26234487g00107 290 MobiDBLite consensus disorder prediction 253 290 - -
Arst26234487g00107 290 CDD STKc_IRAK 2 254 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst26234487g00107 1 261 Glycoside Hydrolase AT3G07070 50.763 1.53e-88 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Arst26234487g00107 Pkinase 6.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst26234487g00107 - - gmx:100794193 465.692