Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst26234487g00106 ATGAAGAACACCTTGCTCACCACCCTCCTAGTCTTCAAGAACACCATTAGAGAAGAGTTGATCAGGAGTGTGCATGTATACCAAATAAAGGATGGGAAAGTAAGGGAAGTTGAAAGAGAGTTTGTGTTCTCAGAGAGTGGCTCCTATGGCGAAATGAGGTCCACACCAATCCTCAGATTGCAGAAGAAGCTTTGTGTTGCTGAAGTTTCTGAAGGGTACCAAAATGGAGTGTGGCTTTGTATCTTTTCCTTTCATAGAAATCACAAGCCTCAATTTTCCAGCATTCCAAACTTGCTTTTGCTCTCAAGAAACCTGAAGCTTCGGACAATCCCAACCTTGCTGAGAGACCTCCGTGTGATATACAAATTGGAAAAAGACAAAGATGTTCTATCAGACTCCACAGGGGAAGAACGCCAAGGAAACAACAAAGATTCCCAACCATTGAGAAAAGTGGTTCCCGTGTTAACTCAGGACCTGAATTTTCTTCCTTATGAAGATGACATGTCCGAATCACCAGACAACAAGCTAGATGTCCAAGCCTTGCCAGATGCAGATTCTGCAGAAAAGAAAAAACGTGCATCTAGTGACCGGGTAGCAAAAATAACGTTATCAGAGTTAGTCAAGTATTTTGATATACCGATTGTAGAAGCGTCAAGAAGGCTAAATGTTGGACTAACAGTTCTGAAGAGGAAATGCAGAGAATTCGGTATTCCTCGCTGGCCTCATAGGAAGATCAAATCACTTGACAGTCTCATTCATGAAATTCAGGAAGAAGCGAACAACCAAGAATCGGATGACAAGGCTGCAGCATTGGCGGCAATAGAGAAACGAAGGATGTTGGAGAGCGAAAAGGAAAACATAGAAAGGAAACCATTCATGGACATACAAAGTGAGACCAAGAAGTTGAGGCAGGACATCTTCAAGAGAAGGCATCGGGCGCGAGCTCAGGTCAAACATAATTCGACTGTCTCCGGCAGCAGCAGTAGCAACAAAACTACCATTGAAACTTGA 1011 0.4322 MKNTLLTTLLVFKNTIREELIRSVHVYQIKDGKVREVEREFVFSESGSYGEMRSTPILRLQKKLCVAEVSEGYQNGVWLCIFSFHRNHKPQFSSIPNLLLLSRNLKLRTIPTLLRDLRVIYKLEKDKDVLSDSTGEERQGNNKDSQPLRKVVPVLTQDLNFLPYEDDMSESPDNKLDVQALPDADSAEKKKRASSDRVAKITLSELVKYFDIPIVEASRRLNVGLTVLKRKCREFGIPRWPHRKIKSLDSLIHEIQEEANNQESDDKAAALAAIEKRRMLESEKENIERKPFMDIQSETKKLRQDIFKRRHRARAQVKHNSTVSGSSSSNKTTIET 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst26234487g00106 336 Coils Coil 270 290 - -
Arst26234487g00106 336 PANTHER PROTEIN RKD4 168 330 IPR044607 GO:0003700
Arst26234487g00106 336 MobiDBLite consensus disorder prediction 318 336 - -
Arst26234487g00106 336 MobiDBLite consensus disorder prediction 166 194 - -
Arst26234487g00106 336 Pfam RWP-RK domain 200 248 IPR003035 -
Arst26234487g00106 336 ProSiteProfiles RWP-RK domain profile. 183 268 IPR003035 -
Arst26234487g00106 336 MobiDBLite consensus disorder prediction 310 336 - -
Arst26234487g00106 336 Coils Coil 245 265 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst26234487g00106 16 328 AtRKD Transcription Factor Family AT4G35590 46.037 3.47e-81 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Arst26234487g00106 RWP-RK 2.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst26234487g00106 - - adu:107475952 625.165