Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst26234487g00072 ATGACTCGCATGCTAAGAATCCTCCAATCCGCCACCGCCAACAACGCCACCACTACCACCGCCATAGCTGCTGCCGTGCCACCGGCCGAGGCAGCCTCAGTCGAGTCCGACTTCGTCGTCATCCTCGCTGCGCTGCTCTGCGCACTCATCTGCGTCGTCGGCCTCATCGCCGTCGCACGATGCGCCTGGCTCCGCCGCGTCCCCGTCGCAGGCACCGGAGCATCTCCACATCAGGCACTCGCCAACCGTGGACTCAAGAAGAAGGTACTCAACTCGTTACCAAAATTCACCTACGTCGACGGCGACGGCGCCGGTGCCGGTAACGGTGCTGACGCCGGCGTCCGGAGGAAGTGGACAGCCTCATCGGAATGCTCAATTTGTCTGGCGGAATTCGCCGCCGGCGACGAGGTCAGGGTGCTTCCGCAGTGTGGCCATGGCTTCCACGTGGCATGTATTGACACGTGGCTGGGATCACACTCCTCCTGCCCGTCCTGCCGCGCCGTCCTGGCCGTTGGGAGATGCCAAAAATGCGGCCAGTTTCCGGCCGTTCCAAACGGCGCTACCGTAGTAGCAATTGCCGGCGAAACAGAATTAAAATCTGTCGTCGGCAACAGCAATGGTAACGCCGGAAGTAATAGCCGGCATGCTAGCAATGATTTCTTGCCTTAA 669 0.6084 MTRMLRILQSATANNATTTTAIAAAVPPAEAASVESDFVVILAALLCALICVVGLIAVARCAWLRRVPVAGTGASPHQALANRGLKKKVLNSLPKFTYVDGDGAGAGNGADAGVRRKWTASSECSICLAEFAAGDEVRVLPQCGHGFHVACIDTWLGSHSSCPSCRAVLAVGRCQKCGQFPAVPNGATVVAIAGETELKSVVGNSNGNAGSNSRHASNDFLP 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst26234487g00072 222 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 28 178 - -
Arst26234487g00072 222 ProSiteProfiles Zinc finger RING-type profile. 124 166 IPR001841 -
Arst26234487g00072 222 SUPERFAMILY RING/U-box 123 170 - -
Arst26234487g00072 222 CDD RING-H2_EL5-like 123 166 - -
Arst26234487g00072 222 SMART FANCL_C_2 120 174 - -
Arst26234487g00072 222 SMART ring_2 124 165 IPR001841 -
Arst26234487g00072 222 MobiDBLite consensus disorder prediction 203 222 - -
Arst26234487g00072 222 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 73 171 IPR013083 -
Arst26234487g00072 222 Pfam Ring finger domain 123 166 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst26234487g00072 1 177 C3H Transcription Factor Family AT1G76410 55.801 7.69e-59 182