Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst26234487g00016 ATGGGCATTTGTCTGATGAAACAGAAATGGCTATGGCTTCTTTATGGTCTGATGATAAATATTCTGATCAATGAAAATGGTGCACTCAGTCCTGATGGTCAGGCACTTCTCAGCTTCAGGACATCAGTTGTTAGCTCAGATGGTGTGTTGTTACAGTGGAGGCCAGAGGATCCTGACCCATGTAAATGGAAAGGAGTGAGATGTGATCCAAAAACCAAGAGAGTAACCCATCTGGCTTTATCTCACCATAAGTTAAGTGGGTCTTTGTCAGCTGACCTTGGAAAGCTAGATCATTTGAGGGTTCTTGCTCTTCACAACAACAACTTCTATGGGACCATTCCATCAGAACTGGGAAACTGCACTGAATTGCAGGGATTATATCTACAGGAAAATTACCTTAGTGGCATGATTCCAGGCGAAATAGGAAATCTTTCACAGCTTCAAAGTTTGGATATATCAAGCAACTCCCTCAGTGGAAACATACCAGCATTGCTTGGAAAATTGTACAACATAAAAAATTTCAATTTATCATCCAATTTTCTGTCTGGACCAATACCGTCTGATGGTGTGCTTGCCAACTTTACTGGAAGCTCCTTCATTGGAAATCGTGGTCTGTGTGGGGTGCAAATTGATGTGACATGTCCTGGATCAAACCCTCAATCTCCAACCTCAGATCAAAATGGAAAGAAGAAATATTCAGGTCGGCTACTTATCAGCGCATCAGCAACTGTGGGTGCTCTTCTTTCGGTGGCACTGATGTGTTTCTGGGGTTGTTTTCTTTACAAGAAGTTTGGTAAAAAGGACAGAATAAGTCTGGCAATGGATGTGGGTGAAGGTGCATCAATTGTGATGTTTCACGGAGATCTACCTTATTCTTCAAAAGATATCATTAAGAAACTAGAGACTTTGAATGAGGAACACATAATAGGGGTTGGAGGGTTTGGAACAGTCTACAAACTTGCAATGGATGATGGGAATGTGTTTGCTTTGAAAAGGATTGTGAAGTTAAATGAGGGTTTCGATCGGTTTTTTGAGAGAGAACTTGAAATTCTGGGAAGCATAAAACATCGCCATCTAGTGAACTTGCGGGGATATTGCAATTCACCTACATCAAAGTTGTTAATATATGATTACTTACCTGGTGGCAGTCTTGATGAAGCTCTTCACGAAAAATCTGAGCAACTAGACTGGGATGCTCGCTTGAATATAATCATTGGAGCTGCAAAAGGGCTCGCCTATTTACACCATGATTGCTCCCCTAGGATCATACACCGTGATATAAAATCAAGCAACATTTTGCTTGATGGAAACCTTGATGCTCGGGTGTCTGATTTTGGACTCGCAAAACTTCTAGAGGATGAAGAATCTCACATCACAACTATTGTAGCTGGAACGTTTGGTTATCTTGCACCAGAGTATATGCAAAGTGGTAGAGCAACTGACAAGAGTGATGTTTATAGTTTTGGGGTCCTGACTCTTGAAGTTCTGAGTGGAAAGCGACCAACAGATGCATCATTTATAGAAAAGGGCCTCAATGTTGTTGGTTGGTTGAATTTTCTAATTTCGGAAAATAGGCGACGGGAAATTGTGGATCCACTATGCGAGGGGGTGCAGATGGAGACCCTTGATGCCTTGCTTTCTGTGGCTATTCAATGTGTTTCATCAAATCCAGAGGACCGACCGAATATGCACCGAGTGGTCCAGTTCTTTGAGTCAGAGATCATGACCCCATGCCCAAGTGACTTCTATGACTCAAGCTCTGACTAG 1767 0.4211 MGICLMKQKWLWLLYGLMINILINENGALSPDGQALLSFRTSVVSSDGVLLQWRPEDPDPCKWKGVRCDPKTKRVTHLALSHHKLSGSLSADLGKLDHLRVLALHNNNFYGTIPSELGNCTELQGLYLQENYLSGMIPGEIGNLSQLQSLDISSNSLSGNIPALLGKLYNIKNFNLSSNFLSGPIPSDGVLANFTGSSFIGNRGLCGVQIDVTCPGSNPQSPTSDQNGKKKYSGRLLISASATVGALLSVALMCFWGCFLYKKFGKKDRISLAMDVGEGASIVMFHGDLPYSSKDIIKKLETLNEEHIIGVGGFGTVYKLAMDDGNVFALKRIVKLNEGFDRFFERELEILGSIKHRHLVNLRGYCNSPTSKLLIYDYLPGGSLDEALHEKSEQLDWDARLNIIIGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLDARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATDKSDVYSFGVLTLEVLSGKRPTDASFIEKGLNVVGWLNFLISENRRREIVDPLCEGVQMETLDALLSVAIQCVSSNPEDRPNMHRVVQFFESEIMTPCPSDFYDSSSD 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst26234487g00016 588 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 73 571 - -
Arst26234487g00016 588 Gene3D Transferase(Phosphotransferase) domain 1 379 576 - -
Arst26234487g00016 588 Gene3D Ribonuclease Inhibitor 30 215 IPR032675 -
Arst26234487g00016 588 SMART serkin_6 303 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst26234487g00016 588 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 379 581 - -
Arst26234487g00016 588 Pfam Leucine rich repeat 98 157 IPR001611 GO:0005515
Arst26234487g00016 588 SUPERFAMILY Protein kinase-like (PK-like) 287 570 IPR011009 -
Arst26234487g00016 588 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Arst26234487g00016 588 Gene3D Phosphorylase Kinase; domain 1 274 378 - -
Arst26234487g00016 588 ProSitePatterns Serine/Threonine protein kinases active-site signature. 422 434 IPR008271 GO:0004672|GO:0006468
Arst26234487g00016 588 FunFam LRR receptor-like serine/threonine-protein kinase FEI 1 277 378 - -
Arst26234487g00016 588 ProSiteProfiles Protein kinase domain profile. 303 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst26234487g00016 588 ProSitePatterns Protein kinases ATP-binding region signature. 309 335 IPR017441 GO:0005524
Arst26234487g00016 588 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 29 191 - -
Arst26234487g00016 588 Pfam Protein kinase domain 305 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst26234487g00016 588 SUPERFAMILY L domain-like 31 195 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst26234487g00016 1 579 Receptor kinase-like Gene Family AT2G35620 74.483 0.0 875
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Arst26234487g00016 Pkinase 1.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst26234487g00016 - - gmx:100819230 1055.43