Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst26234385g00001 ATGCGAACCATATTTCAGGTTGTTGGAACACTCTTCACGCATCATCAAAAATGTGTAATAGTTGATACTCAAGGACAGGGAAACCATAGAAAGATAACCGCATTTATAGGTGGTCTGGATCTTTGTGATGGGCGTTATGATACACCTGAGCACAGGATTGTCCGAGATCTTGACACTGTTTTTCAGAATGATCATCATAATCCTACATTTTCTGCAGGAGTCAAGTGTCCAAGGCAAGCATGGCATGACTTACATTGCAAAATTGAGGGTCCTGCTGTGTATGATATACTCACTAATTTTGAGCAGCGCTGGAGAAAAGCCGCTAGATGGTCTGAGTTGGGTAAAAAAATCAAGAGAGTATCGTATTGGCAAGATGATTCTCTCATCAAGTTGGAACGCATTTCTTGGATTCTCAGTCCTTCTGAGTCAGTTCCAAATGATCATCCTGACTTGTGGGTTTCCAAGGAAGATGACCCCCAAAATTGGAACGTTCAGGTTTTTCGATCTATTGACTCTGGCTCAGTGAAAGGGTTTCCTAAGGATGTACTCGAAGCTGAGAATCAGAACCTCGTTTGTGCAAAAAATTTGGTGATTGACAAGAGTATTCAGACAGCATACATACATGCGATAAGATCTGCACAACATTTTATTTATATCGAGAATCAATATTTCATCGGATCATCCTTTGCATGGCCATCCTACAAAGAAGCAGGTGCTGATAACCTAATTCCTATGGAGTTAGCACTGAAGATAGTTAGTAAGATTAGATCCAAGGAGAGGTTTACAGTTTATATTGTCATCCCAATGTTTCCTGAAGGTGTCCCTTCTTCGGTGGCAATGCAAGAGATTCTGTTTTGGCAGAGACAAACTATGCAGATGATGTATGACATCATAGCTCGGGAGTTAAAAGCTGCAAACCTTGAAAACAGCCATCCACAAGACTACCTAAACTTTTACTGTCTCGGAAACAGGGAGAATTTAACTGAAGTTCCAAACTCAAATGCTTCTGTGATTTCAAATAGTAGCGAAACGGTTGCATCTTCCAAGTACAACCGTTTTATGGTTTATGTACATGCAAAAGGAATGGTTGTGGATGATGAATATGTTATACTCGGATCGGCCAACATTAATCAACGATCAATGGCTGGATCGAGAGATACAGAGATCGCAATGGGTGCATATCAACCCCATCATACATGGGCTAAGAAACAGAGGCATCCACATGGTCATGTATATGGGTACAGAATGTCTTTATGGGCGGAACACATGGGTTACATCGATGAATGCTTCAAGGAGCCTGAAACTTTGGAATGCGTCCAAATTGTGAACAAGATTGCTGAAGAGAACTGGAATAAGTATACAGCTGATTCTTTTGCACCAATGCAAGGGCACCTAATGAAATATCCTGTAAGAGTAGATGCAAATGGCAAGGTCAGCTGCTTACCCGGTTTTGAGACTTTCCCAGATGTTGGTGGCAAAGTACTTGGCTCACGCTCAACCCTTCCCTCTGCTCTAACAACATAG 1524 0.416 MRTIFQVVGTLFTHHQKCVIVDTQGQGNHRKITAFIGGLDLCDGRYDTPEHRIVRDLDTVFQNDHHNPTFSAGVKCPRQAWHDLHCKIEGPAVYDILTNFEQRWRKAARWSELGKKIKRVSYWQDDSLIKLERISWILSPSESVPNDHPDLWVSKEDDPQNWNVQVFRSIDSGSVKGFPKDVLEAENQNLVCAKNLVIDKSIQTAYIHAIRSAQHFIYIENQYFIGSSFAWPSYKEAGADNLIPMELALKIVSKIRSKERFTVYIVIPMFPEGVPSSVAMQEILFWQRQTMQMMYDIIARELKAANLENSHPQDYLNFYCLGNRENLTEVPNSNASVISNSSETVASSKYNRFMVYVHAKGMVVDDEYVILGSANINQRSMAGSRDTEIAMGAYQPHHTWAKKQRHPHGHVYGYRMSLWAEHMGYIDECFKEPETLECVQIVNKIAEENWNKYTADSFAPMQGHLMKYPVRVDANGKVSCLPGFETFPDVGGKVLGSRSTLPSALTT 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst26234385g00001 507 SMART pld_4 353 380 IPR001736 GO:0003824
Arst26234385g00001 507 SMART pld_4 10 45 IPR001736 GO:0003824
Arst26234385g00001 507 SUPERFAMILY Phospholipase D/nuclease 199 438 - -
Arst26234385g00001 507 Pfam PLD-like domain 207 390 IPR025202 -
Arst26234385g00001 507 Pfam Phospholipase D C terminal 427 497 IPR024632 -
Arst26234385g00001 507 SUPERFAMILY Phospholipase D/nuclease 10 112 - -
Arst26234385g00001 507 Gene3D Endonuclease Chain A 3 128 - -
Arst26234385g00001 507 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 10 45 IPR001736 GO:0003824
Arst26234385g00001 507 Pfam Phospholipase D Active site motif 11 45 IPR001736 GO:0003824
Arst26234385g00001 507 Gene3D Endonuclease Chain A 152 405 - -
Arst26234385g00001 507 PANTHER PHOSPHOLIPASE D 6 498 IPR015679 -
Arst26234385g00001 507 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 353 380 IPR001736 GO:0003824
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst26234385g00001 8 506 Phospholipase D Gene Family (Wang group) AT4G00240 59.562 0.0 614
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst26234385g00001 K01115 - gmx:100795859 872.848