Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst26234231g00009 ATGATTGATGGAATTTTCATTATGGAATTCTCTGTAAGAGCTGCGGAACTAACTACTCTATTAGAAAGTAGAATTACCAACTTTTACACTAATTTTCAAGTGGATGAGATCGGTCGAGTGGTCTCAGTTGGAGATGGGATTGCACGCGTTTATGGATTGAAGGAGATTCAAGCTGGGGAAATGGTTGAATTTGCCAGCGGTGTGAAAGGAATAGCGTTGAATCTTGAGAATGAGAATGTCGGAATTGTTGTCTTTGGTAGTGATACCGCTATAAAAGAAGGAGATCTTGTCAAACGCACTGGATCCATTGTGGATGTTCCTGCGGGAAAGGCTATGCTAGGGCGTGTGGTCGACGCCTTGGGAGTCCCCATTGATGGAAGAGGGGCTCTAAGCGATCACGAGCGAAGACGTGTCGAAGTGAAAGCACCTGGGATTATTGAACGTAAATCTGTGCACGAGCCTATGCAAACAGGGTTAAAAGCGGTAGATAGCCTGGTTCCTATAGGCCGTGGTCAACGAGAACTGATAATCGGGGACCGACAAACTGGAAAAACAGCTATTGCTATCGATACCATATTAAACCAAAAGCAAATGAACTCAAGGGCCACCTCTGAGAGTGAGACATTGTATTGTGTCTATGTAGCGATTGGGCAGAAACGCTCAACTGTGGCACAATTAGTTCAAATTCTTTCAGAAGCGAATGCTATAGAATATTCCATTCTTGTAGCAGCCACCGCTTCGGATCCGGCACCTCTGCAATTTCTGGCCCCATATTCTGGGTGTGCCATGGGGGAATATTTCCGCGATAATGGAATGCACGCATTAATAATCTATGATGATCTTAGTAAACAGGCCGTGGCATATCGACAAATGTCATTATTGTTACGCCGACCACCAGGCCGTGAGGCTTTCCCAGGCGATGTTTTCTATTTACATTCCCGTCTCTTAGAAAGAGCCGCTAAACGATCGGACCAGACAGGCGCAGGTAGCTTGACCGCCTTACCCGTCATTGAAACACAAGCTGGAGACGTATCGGCCTATATTCCCACCAATGTGATCTCCATTACTGATGGACAAATCTGTTTGGAAACAGAGCTCTTTTATCGCGGAATTAGACCTGCTATTAACGTCGGCTTATCTGTCAGTCGCGTCGGGTCTGCCGCTCAGTTGAAAGCTATGAAACAAGTCTGCGGTAGTTTAAAACTGGAATTGGCACAATATCGCGAAGTGGCCGCCTTTGCTCAATTTGGCTCAGACCTTGATGCTGCGACTCAGGCATTACTCAATAGAGGTGCAAGGCTGACAGAAGTACTAAAACAACCACAATATGCACCACTTCCTATTGAAAAACAAATTTTAGTCATTTATGCAGCTGTCAATGGATTCTGTGATCGAATGCCATTAGACAAAATTTCTCAATATGAGAGAGCCATTCTAAGCACTATAAAACAAGATTTACTACAATCACTAAAAGGGGGACTCACTAACGAAAGAAAGATAGAACCAGATTCATTCTTAAAAGAACAAACGAAAAACCTAACATGA 1545 0.4414 MIDGIFIMEFSVRAAELTTLLESRITNFYTNFQVDEIGRVVSVGDGIARVYGLKEIQAGEMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEANAIEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAVNGFCDRMPLDKISQYERAILSTIKQDLLQSLKGGLTNERKIEPDSFLKEQTKNLT 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst26234231g00009 514 Gene3D - 390 513 IPR038376 -
Arst26234231g00009 514 PIRSF F_ATPase_subunit_alpha 10 513 IPR005294 GO:0015986|GO:0045261|GO:0046933
Arst26234231g00009 514 Pfam ATP synthase alpha/beta chain, C terminal domain 389 487 IPR000793 GO:0015986
Arst26234231g00009 514 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 158 382 IPR000194 GO:0005524
Arst26234231g00009 514 Gene3D - 103 389 IPR027417 -
Arst26234231g00009 514 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 19 103 IPR036121 GO:0046034|GO:1902600
Arst26234231g00009 514 CDD ATP-synt_F1_alpha_N 36 101 - -
Arst26234231g00009 514 CDD F1-ATPase_alpha_CD 103 385 IPR033732 GO:0032559
Arst26234231g00009 514 NCBIfam F0F1 ATP synthase subunit alpha 12 500 IPR005294 GO:0015986|GO:0045261|GO:0046933
Arst26234231g00009 514 Hamap ATP synthase subunit alpha [atpA]. 10 514 IPR005294 GO:0015986|GO:0045261|GO:0046933
Arst26234231g00009 514 FunFam ATP synthase subunit alpha, mitochondrial 103 389 - -
Arst26234231g00009 514 Pfam ATP synthase alpha/beta family, beta-barrel domain 34 101 IPR004100 GO:0046034|GO:1902600
Arst26234231g00009 514 FunFam ATP synthase subunit alpha 390 514 - -
Arst26234231g00009 514 PANTHER ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 11 512 IPR005294 GO:0015986|GO:0045261|GO:0046933
Arst26234231g00009 514 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 391 508 - -
Arst26234231g00009 514 ProSitePatterns ATP synthase alpha and beta subunits signature. 373 382 IPR020003 GO:0005524
Arst26234231g00009 514 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 105 388 IPR027417 -
Arst26234231g00009 514 Gene3D - 11 102 IPR023366 -
Arst26234231g00009 514 FunFam ATP synthase subunit alpha 10 102 - -
Arst26234231g00009 514 CDD ATP-synt_F1_alpha_C 393 497 IPR000793 GO:0015986
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst26234231g00009 69 388 Primary Pumps ATPases(2) AT4G38510 26.444 3.62e-25 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst26234231g00009 K02132 - gmx:15308624 942.569