Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Arst26234044g00001 | ATGATTGATGGAATTTTCATTATGGAATTCTCTGTAAGAGCTGCGGAACTAACTACTCTATTAGAAAGTAGAATTACCAACTTTTACACTAATTTTCAAGTGGATGAGATCGGTCGAGTGGTCTCAGTTGGAGATGGGATTGCACGCGTTTATGGATTGAAGGAGATTCAAGCTGGGGAAATGGTTGAATTTGCCAGCGGTGTGAAAGGAATAGCGTTGAATCTTGAGAATGAGAATGTCGGAATTGTTGTCTTTGGTAGTGATACCGCTATAAAAGAAGGAGATCTTGTCAAACGCACTGGATCCATTGTGGATGTTCCTGCGGGAAAGGCTATGCTAGGGCGTGTGGTCGACGCCTTGGGAGTCCCCATTGATGGAAGAGGGGCTCTAAGCGATCACGAGCGAAGACGTGTCGAAGTGAAAGCACCTGGGATTATTGAACGTAAATCTGTGCACGAGCCTATGCAAACAGGGTTAAAAGCGGTAGATAGCCTGGTTCCTATAGGCCGTGGTCAACGAGAACTGATAATCGGGGACCGACAAACTGGAAAAACAGCTATTGCTATCGATACCATATTAAACCAAAAGCAAATGAACTCAAGGGCCACCTCTGAGAGTGAGACATTGTATTGTGTCTATGTAGCGATTGGGCAGAAACGCTCAACTGTGGCACAATTAGTTCAAATTCTTTCAGAAGCGAATGCTATAGAATATTCCATTCTTGTAGCAGCCACCGCTTCGGATCCGGCACCTCTGCAATTTCTGGCCCCATATTCTGGGTGTGCCATGGGGGAATATTTCCGCGATAATGGAATGCACGCATTAATAATCTATGATGATCTTAGTAAACAGGCCGTGGCATATCGACAAATGTCATTATTGTTACGCCGACCACCAGGCCGTGAGGCTTTCCCAGGCGATGTTTTCTATTTACATTCCCGTCTCTTAGAAAGAGCCGCTAAACGATCGGACCAGACAGGCGCAGGTAGCTTGACCGCCTTACCCGTCATTGAAACACAAGCTGGAGACGTATCGGCCTATATTCCCACCAATGTGATCTCCATTACTGATGGACAAATCTGTTTGGAAACAGAGCTCTTTTATCGCGGAATTAGACCTGCTATTAACGTCGGCTTATCTGTCAGTCGCGTCGGGTCTGCCGCTCAGTTGAAAGCTATGAAACAAGTCTGCGGTAGTTTAAAACTGGAATTGGCACAATATCGCGAAGTGGCCGCCTTTGCTCAATTTGGCTCAGACCTTGATGCTGCGACTCAGGCATTACTCAATAGAGGTGCAAGGCTGACAGAAGTACTAAAACAACCACAATATGCACCACTTCCTATTGAAAAACAAATTTTAGTCATTTATGCAGCTGTCAATGGATTCTGTGATCGAATGCCATTAGACAAAATTTCTCAATATGAGAGAGCCATTCTAAGCACTATAAAACAAGATTTACTACAATCACTAAAAGGGGGACTCACTAACGAAAGAAAGATAGAACCAGATTCATTCTTAAAAGAACAAACGAAAAACCTAACATGA | 1545 | 0.4414 | MIDGIFIMEFSVRAAELTTLLESRITNFYTNFQVDEIGRVVSVGDGIARVYGLKEIQAGEMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEANAIEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAVNGFCDRMPLDKISQYERAILSTIKQDLLQSLKGGLTNERKIEPDSFLKEQTKNLT | 514 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Arst26234044g00001 | 514 | Gene3D | - | 390 | 513 | IPR038376 | - | |
| Arst26234044g00001 | 514 | PIRSF | F_ATPase_subunit_alpha | 10 | 513 | IPR005294 | GO:0015986|GO:0045261|GO:0046933 | |
| Arst26234044g00001 | 514 | Pfam | ATP synthase alpha/beta chain, C terminal domain | 389 | 487 | IPR000793 | GO:0015986 | |
| Arst26234044g00001 | 514 | Pfam | ATP synthase alpha/beta family, nucleotide-binding domain | 158 | 382 | IPR000194 | GO:0005524 | |
| Arst26234044g00001 | 514 | Gene3D | - | 103 | 389 | IPR027417 | - | |
| Arst26234044g00001 | 514 | SUPERFAMILY | N-terminal domain of alpha and beta subunits of F1 ATP synthase | 19 | 103 | IPR036121 | GO:0046034|GO:1902600 | |
| Arst26234044g00001 | 514 | CDD | ATP-synt_F1_alpha_N | 36 | 101 | - | - | |
| Arst26234044g00001 | 514 | CDD | F1-ATPase_alpha_CD | 103 | 385 | IPR033732 | GO:0032559 | |
| Arst26234044g00001 | 514 | NCBIfam | F0F1 ATP synthase subunit alpha | 12 | 500 | IPR005294 | GO:0015986|GO:0045261|GO:0046933 | |
| Arst26234044g00001 | 514 | Hamap | ATP synthase subunit alpha [atpA]. | 10 | 514 | IPR005294 | GO:0015986|GO:0045261|GO:0046933 |
Showing 1 to 10 of 20 entries
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Arst26234044g00001 | K02132 | - | gmx:15308624 | 942.569 |
Showing 1 to 1 of 1 entries