Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst26234026g00001 TTAGACACAAAATTATCCATTTTTGAAACCGGAATTAAAGTAGTAGATCTTTTAGCTCCTTATCGCCGTGGAGGAAAGATTGGACTCTTTGGCGGAGCTGGAGAGGGTAAAACAGTACTTATTATGGAATTGATCAATAACATTGCCAAAGCTCATGGCGGTGTATCCGTATTTGGCGGAGTGGGGGAGCGTACTCGTGAGGGAAATGATCTTTACATGGAAATGAAAGAATCCGGAGTAATTAATGAAAAAACTATTGGAGAATCAAAAGTTGCTCTAGTGTACGGTCAAATGAATGAACCGCCTGGAGCCCGTATGAGAGTTGGTTTAACTGCCCTAACTATGGCGGAATATTTCAGAGATGTTAATGAACAAGACGTGCTTCTATTTATCGACAATATCTTCCGATTCGTCCAAGCGGGATCCGAAGTGTCAGCCTTATTGGGTCGAATGCCTTCCGCTGTAGGTTATCAACCGACCCTTAGTACCGAAATGGGTTCTTTACAAGAAAGAATTACTTCTACCAAAGAAGGGTCTATAACTTCTATTCAAGCAGTTTATGTACCCGCAGACGATTTGACCGACCCTGCCCCTGCTACGACATTTGCACATTTGGATGCTACGACCGTACTATCAAGAGGATTGGCTGCCAAAGGTATCTATCCAGCTGTAGATCCTTTAGATTCAACGTCAACTATGCTCCAACCTCGGATTGTTGGTGAAGAACATTATGAAACTGCGCAAAGAGTTAAACAAACTTTACAGCGTTACAAAGAACTTCAGGACATTATAGCTATCCTTGGGTTGGACGAATTATCCGAAGAGGATCGCTTAACTGTAGCAAGAGCACGGAAAATTGAGCGTTTCTTATCACAGCCTTTTTTCGTAGCAGAAGTATTTACCGGTTCGCCAGGAAAATATGTAGGTCTAGCAGAAACAATTAGAGGGTTTAAATTGATTCTTTCTGGAGAATTAGACGGTCTTCCCGAGCAAGCCTTTTATTTGGTGGGTAATATCGATGAAGCAACTGCGAAGGCTACGAACTTAGAAATGGAGGGGAAATTGAAGAAATGA 1074 0.4209 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGEGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKTIGESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEATAKATNLEMEGKLKK 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst26234026g00001 357 CDD ATP-synt_F1_beta_C 238 345 - -
Arst26234026g00001 357 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 11 231 IPR000194 GO:0005524
Arst26234026g00001 357 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 236 IPR027417 -
Arst26234026g00001 357 SMART AAA_5 23 215 IPR003593 GO:0016887
Arst26234026g00001 357 Gene3D - 1 233 IPR027417 -
Arst26234026g00001 357 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 234 349 - -
Arst26234026g00001 357 Gene3D - 234 357 IPR024034 -
Arst26234026g00001 357 FunFam ATP synthase subunit beta 234 353 - -
Arst26234026g00001 357 PANTHER ATP SYNTHASE 2 353 - -
Arst26234026g00001 357 NCBIfam F0F1 ATP synthase subunit beta 2 349 IPR005722 GO:0015986|GO:0045261|GO:0046933
Arst26234026g00001 357 ProSitePatterns ATP synthase alpha and beta subunits signature. 222 231 IPR020003 GO:0005524
Arst26234026g00001 357 CDD F1-ATPase_beta_CD 1 236 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst26234026g00001 10 295 Primary Pumps ATPases(2) AT1G78900 29.836 5.16e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst26234026g00001 K02112 - adu:127743769 692.189